Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_021783.1 Length=59254 Score E Sequences producing significant alignments: (Bits) Value seq11023 865 0.0 >seq11023 Length=509 Score = 865 bits (958), Expect = 0.0 Identities = 497/509 (98%), Gaps = 0/509 (0%) Strand=Plus/Minus Query 13148 CATGTTCGCCTTCGCGCAGGGATGGCCGCTTGATGAAGCCCTCGTCACGCCGAAAGCCGT 13207 ||||||||||||||||||||| ||||||||| | |||||||||||| ||||| |||| || Sbjct 509 CATGTTCGCCTTCGCGCAGGGCTGGCCGCTTAACGAAGCCCTCGTCGCGCCGGAAGCAGT 450 Query 13208 TGCACCGTCGGCCGCCCGGTCATGGCAGTACGAATTCCGGAACGTCAAAGACAGCAACGA 13267 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 449 TGCACCGTCGGCCTCCCGGTCATGGCGGTACGAATTCCGGAACGTCAAAGACAGCAACGA 390 Query 13268 TTATTCCGAATTAGTCAAAGTGCTACATGATGCGCTGACGCAAGCCGCGTATGGTAAAGG 13327 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 389 TTATTCCGAATTAGTCAAAGTGCTACACGATGCGCTGACGCAAGCCGCGTATGGTAAAGG 330 Query 13328 GCGCGAGCGCCACGCCAATGACCTGCCGTTCAGCCAGCAGCCGATGAACGCCATTTCTGA 13387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 329 GCGCGAGCGCCACGCCAATGACCTGCCGTTCAGCCAGCAGCCGATGAACGCCATTTCTGA 270 Query 13388 CCTGATCGATAGCCCGCTTGGCTTGGTCTATCAGGTGTGCAAGAAGGTCGTAGAAGGCGT 13447 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 269 CCTGATCGGTAGCCCGCTCGGCTTGGTCTATCAGGTGTGCAAGAAGGTCGTAGAAGGCGT 210 Query 13448 CAACCTGCCAACGCATGACCAAAGGGTTAGGGAGTTGCTCGGCGTGATCAATTATACTGC 13507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209 CAACCTGCCAACGCATGACCAAAGGGTTAGGGAGTTGCTCGGCGTGATCAATTATACTGC 150 Query 13508 CGGGATTGTCATCTGGCTAAATCGCCACCAATCAAATCCACAGAAGGAATAAAGGGGCCA 13567 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 149 CGGGATTGTCATCTGGCTAAATCGCCACCAATCAAATCCACCGAAGGAATAAAGGGGCCA 90 Query 13568 CCATGAAGAAGATCGCTGCGCTAACGCTGTTTGTATTGATTATCTGCGGTGTGCTGTTTG 13627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89 CCATGAAGAAGATCGCTGCGCTAACGCTGTTTGTATTGATTATCTGCGGTGTGCTGTTTG 30 Query 13628 TCATTGGCCGTGTGGGCGCGGCGATCGGG 13656 ||||||||||||||||||||||||||||| Sbjct 29 TCATTGGCCGTGTGGGCGCGGCGATCGGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189466006671232