Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq9243 123 1e-23 >seq9243 Length=648 Score = 123 bits (136), Expect = 1e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 37895 TGGAATCCACATGAAGTAGATAAGGCAGCATTGCCACCTTGTCATACATTGTTCCAGTTC 37954 ||||||||| ||||| ||| || || || |||||||||||| |||| ||||| || Sbjct 643 TGGAATCCAGCAGAAGTTGATGAGATGGCTTTACCACCTTGTCATTCATTTTTCCAATTT 584 Query 37955 TTTGTAGAGAATGGAAAACTAAGCTGTCAGTTATATCAACGTAGTGCTGATTTCTTCTTA 38014 | ||||| | | || ||||| ||||| || |||||| | ||||| ||| | || ||| Sbjct 583 TATGTAGCGGAAGGGAAACTTTCTTGTCAATTGTATCAAAGAAGTGCCGATGTATTTTTA 524 Query 38015 GGTGTTCCATTTAATATTGCAAGCTATGCGTTGCTTACACATATCGTAGCTGCAGAATGT 38074 || || || || ||||| || ||||| ||| | |||||| | | || |||||| Sbjct 523 GGAGTGCCGTTCAATATCGCTTCTTATGCATTGTTAACACATTTAATTGCACATGAATGT 464 Query 38075 GGATTAGAAGTTGGTGAATTTGT 38097 || ||||| ||||||||||| || Sbjct 463 GGGTTAGATGTTGGTGAATTCGT 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248775649619068