Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_024205.1 Length=159837 Score E Sequences producing significant alignments: (Bits) Value seq9243 87.8 2e-12 >seq9243 Length=648 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 19168 AGTTTAGGTAATTTTCTTGGTTCGTTTAATAGCTGCTCTTTAGCTTGCTCGATATGGTTA 19227 |||| ||| || || | |||||| |||||| || || ||||||| | ||| || Sbjct 351 AGTTGAGGCAAGTTACGCGGTTCGCGACTTAGCTGTTCATTTACTTGCTCTAAATGATTT 410 Query 19228 AGATATAGATGTACGTCCCCACCGTTGTAAATGAGAGAACCTACTTCCAATCCGCATTCT 19287 | ||| | |||| || ||| | | | || || ||| || || || || ||||| Sbjct 411 AAATAGATATGTGTATCTCCAAAGCTATGAACGAATTCACCAACATCTAACCCACATTCA 470 Query 19288 AGTGCGATTAAATGAAGTAACAATGCATAACTAGCAATATTGAAAGCTAGTCCTAAAAAT 19347 |||| |||||||| ||||||||||||| ||| |||||||| | | |||||||||| Sbjct 471 TGTGCAATTAAATGTGTTAACAATGCATAAGAAGCGATATTGAACGGCACTCCTAAAAAT 530 Query 19348 CCATCG 19353 ||||| Sbjct 531 ACATCG 536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511278836511520