Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_025442.1 Length=59578 Score E Sequences producing significant alignments: (Bits) Value seq11023 832 0.0 >seq11023 Length=509 Score = 832 bits (922), Expect = 0.0 Identities = 490/509 (96%), Gaps = 0/509 (0%) Strand=Plus/Plus Query 46017 CCCGATCGCCGCGCCCACACGGCCAATGACAAACAGCACACCGCAGATAATCAATACAAA 46076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCCGATCGCCGCGCCCACACGGCCAATGACAAACAGCACACCGCAGATAATCAATACAAA 60 Query 46077 CAGCGTTAGCGCAGCGATCTTCTTCATGGTGGCCCCTTTATTCCTTCGGTGGATTTGATT 46136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CAGCGTTAGCGCAGCGATCTTCTTCATGGTGGCCCCTTTATTCCTTCGGTGGATTTGATT 120 Query 46137 GGTGGCGATTTAGCCAGATGACAATCCCGGCAGTATAATTGATCACGCCGAGCAACTCCC 46196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGTGGCGATTTAGCCAGATGACAATCCCGGCAGTATAATTGATCACGCCGAGCAACTCCC 180 Query 46197 TAACCCTTTGGTCATGAGTTGGCAGGTTGACGCCTTCCACGACCTTCTTGCATACCTGAT 46256 |||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| Sbjct 181 TAACCCTTTGGTCATGCGTTGGCAGGTTGACGCCTTCTACGACCTTCTTGCACACCTGAT 240 Query 46257 ACACCAAGCCGAGCGGGCTATTGATCAGGTCAGAAATGGCGTTCATCGGCTGCTTGCTGA 46316 | |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 241 AGACCAAGCCGAGCGGGCTACCGATCAGGTCAGAAATGGCGTTCATCGGCTGCTGGCTGA 300 Query 46317 ACGGCAGGTCATTCGCGTGGCGCTCGCGTCCTTTACCATACGCGGCTTGTGTCAGCGCAT 46376 ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 301 ACGGCAGGTCATTGGCGTGGCGCTCGCGCCCTTTACCATACGCGGCTTGCGTCAGCGCAT 360 Query 46377 CATGTAGCACTTTGACTAATTCGGAATAATCGTTGCTATCTTTGACGTTCCGGAATTCGT 46436 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 361 CGTGTAGCACTTTGACTAATTCGGAATAATCGTTGCTGTCTTTGACGTTCCGGAATTCGT 420 Query 46437 ACTGCCATGACCGGGCGGCCGACGGTGCCACGGCTTCCGGCGCGACGAGGGCTTCGTCAA 46496 || |||||||||||| |||||||||||| || ||||||||||||||||||||||||| || Sbjct 421 ACCGCCATGACCGGGAGGCCGACGGTGCAACTGCTTCCGGCGCGACGAGGGCTTCGTTAA 480 Query 46497 GTGGCCATCCCTGCGCGAAGGCGAACATG 46525 | ||||| ||||||||||||||||||||| Sbjct 481 GCGGCCAGCCCTGCGCGAAGGCGAACATG 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190502668826080