Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq9243 120 2e-22 >seq9243 Length=648 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 19970 TGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACACTATTTCAATTC 20029 |||||||| || |||| || | | |||||||||||| ||| || | || ||||| Sbjct 643 TGGAATCCAGCAGAAGTTGATGAGATGGCTTTACCACCTTGTCATTCATTTTTCCAATTT 584 Query 20030 TTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTT 20089 | ||| || || ||| | ||||| || ||||||||| ||||||| || |||| | Sbjct 583 TATGTAGCGGAAGGGAAACTTTCTTGTCAATTGTATCAAAGAAGTGCCGATGTATTTTTA 524 Query 20090 GGTGTTCCATTTAATATTGCATCTTATGCTTTACTTACACACTTAGTTGCATTAGAATGT 20149 || || || || ||||| || |||||||| || | ||||| ||| ||||| |||||| Sbjct 523 GGAGTGCCGTTCAATATCGCTTCTTATGCATTGTTAACACATTTAATTGCACATGAATGT 464 Query 20150 GGGCTTAATGTTGGTGAGTTTGTT 20173 ||| | |||||||||| || ||| Sbjct 463 GGGTTAGATGTTGGTGAATTCGTT 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318967670522996