Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_030925.1 Length=138081 Score E Sequences producing significant alignments: (Bits) Value seq9243 82.4 7e-11 >seq9243 Length=648 Score = 82.4 bits (90), Expect = 7e-11 Identities = 164/243 (67%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 46538 ATGATTCAAATATATGTGGCAGTCTCCAAAAGTGTGAATAAACTTACCTACTTTTAAATC 46597 |||||| ||||| || || |||||||| | |||| || | ||| || | ||| | Sbjct 404 ATGATTTAAATAGATATGTGTATCTCCAAAGCTATGAACGAATTCACCAACATCTAACCC 463 Query 46598 TAAGGTATGAGCGATTAAGTGAGTAAGTAAAGCATAGCTAGCTATATTGAAGGGTACACC 46657 | ||| || ||||| || || | || ||||| ||| |||||||| || || || Sbjct 464 ACATTCATGTGCAATTAAATGTGTTAACAATGCATAAGAAGCGATATTGAACGGCACTCC 523 Query 46658 TAAGAAAAAATCTGACGATCTCTGATATAACTTACAGGATAGGGTGCCGTTATCTACATA 46717 ||| || | ||| | ||| ||||| || | ||| || || | || | ||||||| Sbjct 524 TAAAAATACATCGGCACTTCTTTGATACAATTGACAAGAAAGTTTCCCTTCCGCTACATA 583 Query 46718 GAACTGGAACATAGTGTGGCAACTTGGTAAAGCTATTTCATCTAGTACACTAGGATTCCA 46777 || ||||| | | || ||| ||||||||| || ||||| | | | |||||||| Sbjct 584 AAATTGGAAAAATGAATGACAAGGTGGTAAAGCCATCTCATCAACTTCTGCTGGATTCCA 643 Query 46778 CGC 46780 ||| Sbjct 644 CGC 646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441669379718560