Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_031241.1 Length=43293 Score E Sequences producing significant alignments: (Bits) Value seq5866 93.3 1e-14 >seq5866 Length=1231 Score = 93.3 bits (102), Expect = 1e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 31846 TAAAGGTTACACACATTCATCAACTACAGAAATCGAGCATAAAGATGGGAGTACATCAGT 31905 ||| || || |||||||| || | |||| |||| |||| || || || || Sbjct 388 TAATGGATATACACATTCGAGTACAATCCAAATACAGCACCAAGACGGAAGAACTAGTGT 447 Query 31906 AAGAATGAATACCAAGTGGACGCAAAAAGGCCGTTTATTCATCTACGAGTTACTGAAAGA 31965 | |||||| |||||||||||||||||||| ||||||||||| || |||||||| ||| | Sbjct 448 GAAAATGAACACCAAGTGGACGCAAAAAGGACGTTTATTCATATATGAGTTACTAAAAAA 507 Query 31966 ACATGACATTTTACCAGTAATAGAAAAGG 31994 | | | || |||||||| | |||| || Sbjct 508 AGAAGGAGTTCTACCAGTAGTCGAAAGGG 536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138397597246760