Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_031930.1 Length=59518 Score E Sequences producing significant alignments: (Bits) Value seq11023 832 0.0 >seq11023 Length=509 Score = 832 bits (922), Expect = 0.0 Identities = 490/509 (96%), Gaps = 0/509 (0%) Strand=Plus/Plus Query 45964 CCCGATCGCCGCGCCCACACGGCCAATGACAAACAGCACACCGCAGATAATCAATACAAA 46023 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCCGATCGCCGCGCCCACACGGCCAATGACAAACAGCACACCGCAGATAATCAATACAAA 60 Query 46024 CAGCGTTAGCGCAGCGATCTTCTTCATGGTGGCCCCTTTATTCCTTCGGTGGATTTGATT 46083 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CAGCGTTAGCGCAGCGATCTTCTTCATGGTGGCCCCTTTATTCCTTCGGTGGATTTGATT 120 Query 46084 GGTGGCGATTTAGCCAGATGACAATCCCGGCAGTATAATTGATCACGCCGAGCAACTCCC 46143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGTGGCGATTTAGCCAGATGACAATCCCGGCAGTATAATTGATCACGCCGAGCAACTCCC 180 Query 46144 TAACCCTTTGGTCATGAGTTGGCAGGTTGACGCCTTCCACGACCTTTTTGCATACCTGAT 46203 |||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||| Sbjct 181 TAACCCTTTGGTCATGCGTTGGCAGGTTGACGCCTTCTACGACCTTCTTGCACACCTGAT 240 Query 46204 ACACCAAGCCGAGCGGGCTATTGATCAGGTCAGAAATGGCGTTCATCGGCTGCTGGCTGA 46263 | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 241 AGACCAAGCCGAGCGGGCTACCGATCAGGTCAGAAATGGCGTTCATCGGCTGCTGGCTGA 300 Query 46264 ACGGCAGGTCATTCGCGTGGCGCTCGCGTCCTTTACCATACGCGGCTTGTGTCAGCGCAT 46323 ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 301 ACGGCAGGTCATTGGCGTGGCGCTCGCGCCCTTTACCATACGCGGCTTGCGTCAGCGCAT 360 Query 46324 CATGTAGCACTTTGACTAATTCGGAATAATCGTTGCTGTCTTTGACGTTCCGGAATTCGT 46383 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CGTGTAGCACTTTGACTAATTCGGAATAATCGTTGCTGTCTTTGACGTTCCGGAATTCGT 420 Query 46384 ACTGCCATGACCGGGCGGCCGACGGTGCAACGGCTTTCGGTGCGACGAGGGCTTCATCAA 46443 || |||||||||||| ||||||||||||||| |||| ||| |||||||||||||| | || Sbjct 421 ACCGCCATGACCGGGAGGCCGACGGTGCAACTGCTTCCGGCGCGACGAGGGCTTCGTTAA 480 Query 46444 GCGGCCATCCCTGCGCGAAGGCGAACATG 46472 ||||||| ||||||||||||||||||||| Sbjct 481 GCGGCCAGCCCTGCGCGAAGGCGAACATG 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190310694352960