Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593135.1_202016-03- 16] 10,252 sequences; 124,731,640 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq178 206 5e-48 seq1291 152 9e-32 seq100 149 1e-30 seq1502 134 2e-26 seq1195 131 3e-25 seq1113 125 1e-23 seq768 122 2e-22 seq526 100 5e-16 seq2455 95.1 2e-14 seq322 86.0 1e-11 seq2251 84.2 4e-11 >seq178 Length=73968 Score = 206 bits (228), Expect = 5e-48 Identities = 358/509 (70%), Gaps = 11/509 (2%) Strand=Plus/Minus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || || || || |||||| || || |||||||| |||| ||| ||||| Sbjct 5518 TTTTTGATAATCTGATACGCGTTTTTCAAAGAAATTTGTTTTACCTTGTAAACTAATTAA 5459 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAA-TACATATA 38949 || |||||||||||| ||||| | | |||||| ||||| |||| | ||| | | || Sbjct 5458 ATCCATAAAATCAAAAGGATTCTCTGAATTATACAATTTTGCTCC-ACCAAGTGCCACTA 5400 Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATT-AATTCACAATTCATACCCAAT 39008 |||||||||| || |||||||||| ||||| | |||| ||||| | |||||||| | | Sbjct 5399 ATAATCTATCAGCTACAAATTCAATATATTTTTTCATTAAATTCGC-GTTCATACCAATT 5341 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagctt--gtttaa 39066 || |||| ||||||||| || | |||||||| ||||||| || |||| | | | Sbjct 5340 AAATTAACTGGTAATGCTTCTGTTAAAAATTCTTGTTCTATTGTAACCGCTTCCGCTATA 5281 Query 39067 ttatcataattatattattttttgataatttatatttaatatgattcgcatataGTAAAC 39126 || | | || | | ||| ||| | || |||| | | ||| || | || Sbjct 5280 ATAGCTT--CTACAGTTTTTGTTGGAGGTCGTGCACGAAGATGAGT-GAATA-AG-AGAC 5226 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 |||||||||| ||| || ||||| || | ||| || | ||| || ||||||||||| Sbjct 5225 ATGCAAAATCACAATGCAATCCTTCATCTCGAGAAATTAGTTCGTTGGAAAAAGTTAATC 5166 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 ||||||| | |||||| || || | |||||| ||||| || ||| | ||||||||||| Sbjct 5165 CTGGCATCATTCCTCTTTTCTTTAACCAAAAGATTGACGCGAAAGCTCCAGAAAAGAATA 5106 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 | || || ||| ||||| |||| | | | | |||| ||| | ||| ||| Sbjct 5105 TTCCTTCAACAGCGGCAAACGCTACAAGACGTTCAGCAAATGAAGATTCCTTATCGGAAA 5046 Query 39307 TCCAATTTATGGCCCAATCTGCttttttt 39335 |||| | |||||||| ||||||||| Sbjct 5045 TCCATCGAAGAGCCCAATCCGCTTTTTTT 5017 Score = 109 bits (120), Expect = 1e-18 Identities = 184/262 (70%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 39417 GAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCT 39476 || |||||||| ||||| | | ||| || || |||||| |||||| |||||| Sbjct 4856 GAGTACATTTCTGAATGGATATTTTCGATCATGATCTGAAATCCATAAAAACATCTTGCT 4797 Query 39477 TCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCA 39536 |||| | || ||||| | || ||||| |||||||| ||| ||||||||||| Sbjct 4796 TCTGGAATTTGGACTTCATTACTAAAACGTTCCACTAAATTTTCATTGACAATACCATCC 4737 Query 39537 GATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTT 39596 || || || ||||| || ||||| | |||||| |||||| | ||| |||| ||| Sbjct 4736 GAGGCGGCAAAGAAGGCCAAAACGTGAGAAATAAAGAATTTTTCTTCATC-GTTAAGTTT 4678 Query 39597 ----TCCCAA-GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATG 39651 |||||| |||| | ||| || || | || ||||| || | |||||||| || | Sbjct 4677 ATACTCCCAATCATTC-ATATCCTTGGAAAGGTCAACTTCCTCAACAGTCCAAAATGAAG 4619 Query 39652 CTACGGATTTTTTATACATTTG 39673 || ||| ||||| |||||||| Sbjct 4618 CTTCGGCCTTTTTGTACATTTG 4597 >seq1291 Length=36373 Score = 152 bits (168), Expect = 9e-32 Identities = 168/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 171860 TACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATC 171919 ||| || ||||| || | ||||| |||||| ||||| || | || ||| | || || Sbjct 19793 TACCAAGTGTAATGTTGATTCTTTTTGAATATTGTAATCGGAAAGTGAACGTCCATCTTC 19852 Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 || |||||||||||||| ||||| | ||||| || || || ||||||||||||||||| Sbjct 19853 TAACTGTTTACCAGCAAATATTAAACGTTGTTGATCCGGGGGGATTCCTTCTTTATCTTG 19912 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 ||||| | ||| || ||| || ||||| ||| ||||||| |||||||||||| Sbjct 19913 AATTTTTTCTTTGACTTTATCGATGGTATCGCTACTTTCAACTTCTAAAGTAATGGTTTT 19972 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAAAAA 172082 |||||| | |||||||| || || ||||| | ||| ||||| Sbjct 19973 ACCAGTAAGTGTTTTAACAAAAATTTGCATGT--TTAAAAAAA 20013 >seq100 Length=143921 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||||||||||||| Sbjct 58889 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 58948 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || |||||||||||||| || || || | ||||| || || Sbjct 58949 GACAACGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGA 59008 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| || || ||||||| | | ||| ||||| || || || Sbjct 59009 GGGATACCTTCTTTATCTTGAATCTTCGTTTTTACTTGATCTATGGTATCAGAGGACTCG 59068 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| |||||||| || | || || | ||| || ||||| Sbjct 59069 ACTTCAAGAGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 59118 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||||||||||||| Sbjct 59345 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 59404 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || ||||||||||||||||| || ||||| | ||||| || || Sbjct 59405 GACAAAGTACGCCCATCTTCCAATTGTTTACCAGCGAAGATTAAGCGTTGTTGATCTGGA 59464 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| |||||||| || || ||| || | | |||||||| || || Sbjct 59465 GGAATTCCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCAATAGTATCATTGGACTCG 59524 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || ||||||||||| ||||| | || || | |||||| ||||| Sbjct 59525 ACTTCAAGGGTAATGGTTTTCCCAGTAAGGGTCTTGACGAATATTTGCAT 59574 Score = 140 bits (154), Expect = 6e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||| ||||| ||| Sbjct 59117 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTGGATTCTTTTTGAATGTTATAGTCT 59176 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || |||||||||||||| || || || | ||||| || || Sbjct 59177 GACAATGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGG 59236 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || |||||||||||||| || || | |||| || || ||| ||||| || || || Sbjct 59237 GGGATACCTTCTTTATCTTGAATCTT-TGCTTTAACTTGGTCTATGGTATCAGAGGACTC 59295 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| ||||| || |||||||| || | ||||||| ||| || ||||| Sbjct 59296 TACTTCAAGAGTGATTGTTTTACCGGTCAGCGTTTTAACGAAAATTTGCAT 59346 Score = 136 bits (150), Expect = 7e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||| || | ||| | ||| | ||||| ||||| |||||||||||| || Sbjct 58435 ACCACCCCGAAGACGAAGTACGAGATGGAGAGTAGATTCTTTTTGAATATTATAATCCGA 58494 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || | || ||||||||||||||||| || || || | || || || || || Sbjct 58495 TAAAGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATCAAGCGTTGCTGATCTGGAGG 58554 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTCTA 172020 || ||||| |||||||| || || | |||| || || ||| ||||| || || || | Sbjct 58555 AATACCTTCCTTATCTTGAATCTT-TGCTTTAACTTGGTCTATGGTATCAGAGGACTCAA 58613 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| || ||||| |||||||| || | || || | ||| || ||||| Sbjct 58614 CTTCAAGGGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 58662 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | || || ||||||||| || Sbjct 58661 ATACCACCTCTTAAACGAAGTACGAGATGGAGAGTTGATTCCTTTTGAATATTATAGTCC 58720 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || |||||||||||||| || || || || | ||||| || || Sbjct 58721 GATAAAGTACGGCCATCTTCCAATTGTTTACCGGCGAAGATCAAGCGTTGTTGATCTGGG 58780 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || ||| || | | ||| ||||| || || || Sbjct 58781 GGGATACCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCTATGGTATCAGAGGACTCG 58840 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| |||||||| || | || || | ||| || ||||| Sbjct 58841 ACTTCAAGAGTAATTGTTTTACCGGTGAGAGTCTTGACGAAAATTTGCAT 58890 Score = 89.7 bits (98), Expect = 9e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||||||| || | ||| | ||| | ||| | |||||| ||| || ||||| Sbjct 59573 ATACCACCTCTAAGACGGAGTACGAGATGAAGAGTTGACTCTTTCTGAATGTTGTAATCA 59632 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| ||| |||| ||||| ||||| || ||||| ||||| | ||||| || || Sbjct 59633 GATAAGCTACGTCCGTCTTCCAACTGTTTTCCGGCAAAGATTAAGCGTTGTTGATCCGGA 59692 Query 171960 GGTATTCCT 171968 || |||||| Sbjct 59693 GGAATTCCT 59701 >seq1502 Length=20690 Score = 134 bits (148), Expect = 2e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || | ||| | ||| | ||| || ||||| |||||| Sbjct 13000 ATACCACCTCTTAAACGGAGCACGAGATGGAGAGTTGACTCCTTTTGGATATTGTAATCT 12941 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| | || |||||||||||||| ||||| || || | || || || || Sbjct 12940 GACAAGGTACGTCCATCTTCCAATTGTTTACCGGCAAAGATCAAGCGTTGCTGATCCGGG 12881 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || |||||||| ||||| || || ||| || || || || |||||||| || || Sbjct 12880 GGAATGCCTTCTTTGTCTTGAATCTTCGCTTTAAC-TTGGTCAATGGTATCTGAGGACTC 12822 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| |||||||| |||||||| || | || |||| ||| || ||||| Sbjct 12821 TACTTCAAGAGTAATAGTTTTACCGGTAAGAGTCTTAACGAAAATTTGCAT 12771 Score = 100 bits (110), Expect = 5e-16 Identities = 112/148 (76%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||| ||||||||||| ||||| ||||| || || || || |||||||| ||||| || Sbjct 13144 TGTTTGCCAGCAAAAATCAATCTTTGTTGATCTGGAGGGATACCTTCTTTGTCTTGAATC 13085 Query 171984 TTATTTTTTACATTAGTT--ATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTAC 172041 || | || || | ||| || ||||| || ||||| ||||| |||||||| ||||| | Sbjct 13084 TTTGTCTTGAC--TTGTTCAATTGTATCAGAAGATTCAACTTCAAGAGTAATAGTTTTCC 13027 Query 172042 CAGTTAATGTTTTAATGAATATCTGCAT 172069 | || | || || | || |||||||| Sbjct 13026 CGGTGAGGGTCTTTACAAAAATCTGCAT 12999 >seq1195 Length=66079 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | |||||| | ||||| ||| | ||| | |||||| ||| ||||||||| Sbjct 11472 ATACCTCCGCGAAGTCGAAGTACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCT 11413 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| ||||| ||||| | | || ||||| || Sbjct 11412 GAAAGGGTACGACCGTCTTCAAGTTGTTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGG 11353 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || ||||||||||| ||||| ||||| | |||| || || ||||| || || ||||| Sbjct 11352 GGAATTCCTTCTTTGTCTTGAATTTT-TGCTTTAACTTGGTCAATAGTGTCGGAAGATTC 11294 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || || || || || | ||||||| ||| || ||||| Sbjct 11293 AACTTCAAGGGTGATTGTCTTTCCGGTAAGGGTTTTAACGAAGATTTGCAT 11243 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || ||||| | || | |||||| |||||| || || Sbjct 11928 ATACCACCACGAAGACGAAGCACCAAATGAAGTGTTGACTCTTTTTGAATATTGTAGTCA 11869 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | ||||||||| || ||||| | | || || || || Sbjct 11868 GAAAGGGTTCGTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGG 11809 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| || || |||||| | | || ||||| || || || Sbjct 11808 GGAATACCTTCTTTGTCTTGAATCTTTGCTTTTACTTGATCGATGGTATCGGAAGACTCA 11749 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||||||| ||||||| ||||||| || || ||||| Sbjct 11748 ACTTCCAAAGTAATGGTTTTTCCAGTTAGAGTTTTAACAAAAATTTGCAT 11699 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| || | || || | || |||||||| |||||||| ||||| || | Sbjct 12108 ATGTTATAATCCGAAAGAGTACGACCATCTTCCAATTGCTTACCAGCGAAAATCAAACGT 12049 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || || || || || ||||||||||| ||||| |||| || | | || ||| Sbjct 12048 TGCTGATCTGGAGGGATACCCTCTTTATCTTGAATTTTGGTTTTAACCTGATCAATGGTA 11989 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||||| || || || ||||| || |||||||| | |||||| | || || ||| Sbjct 11988 TCAGATGATTCGACCTCAAGGGTAATCGTCTTACCAGTAAGTGTTTTTACAAAAATTTGC 11929 Query 172068 AT 172069 || Sbjct 11928 AT 11927 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | ||| || | || | ||| | ||| | ||||| |||||| || || Sbjct 11700 ATACCGCCACGAAGACGGAGAACGAGATGAAGAGTGGATTCTTTTTGAATATTGTAGTCG 11641 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | |||||||||||| ||||| | | || ||||| || Sbjct 11640 GAAAGGGTTCGTCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGTTGCTGGTCTGGG 11581 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || || || |||||||| ||||| ||||||| || || || ||||| || || || Sbjct 11580 GGGATACCCTCCTTATCTTGAATTTTGGTTTTTAC-TTGGTCGATGGTATCCGAGGACTC 11522 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| || | || |||||||| || || | ||| || | ||| || ||||| Sbjct 11521 TACGTCCAAGGTGATGGTTTTGCCGGTGAGTGTCTTTACGAAGATTTGCAT 11471 >seq1113 Length=64455 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| || | || |||||||||||||| || | ||| | | ||||| ||||| | Sbjct 45694 CCACCCCTTAATCTTAATACTAAATGTAGCGTGGACTCAACACATATATTGTAATCACTT 45635 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| || | || || | ||| |||||||||||||||||||| ||||| || |||||| Sbjct 45634 AAAGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGT 45575 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || |||||||| || ||||| |||||| | | || ||||| | || ||| Sbjct 45574 ATACCTTCTTTTTCAGTAATTTTTGTTTTTAATTGATCAATTGTATCACTAAACTCGACT 45515 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 172056 || | || | ||||| |||||||||||||||| Sbjct 45514 TCAATTGTTAGAGTTTTTCCAGTTAATGTTTTAA 45481 >seq768 Length=116656 Score = 122 bits (134), Expect = 2e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | |||| ||||| | ||||| || | | ||| || || ||||| || Sbjct 29065 ACCACCAATTAGTCTCAATACCAGATGTATTGTGGAATGTTTTTTTATCTTGTAATCCGA 29006 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | || | || || | | |||||||||||| |||||| ||||| || || || Sbjct 29005 TAACGTACGGCCATCTTCAAGTAACATACCAGCAAAAACTAATCTTTGTTGATCTGGAGG 28946 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||| ||||||||||| || ||||| | ||||| ||| || ||||| | | || Sbjct 28945 TATCCCTTCTTTATCCTGAATTTTTTCTTTTAGGTTATAAATTGTATCACTAAAATTTAA 28886 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| || || ||||||||||||||||| |||| |||||| || Sbjct 28885 TTCTAGTGTTATAGTTTTACCAGTTAATGTATTAACGAATATTTG 28841 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 171930 CCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTT 171989 |||||| |||||||| | ||||| | | ||||| ||||||||||| || ||||| | | Sbjct 23669 CCAGCATAAATTAATTTTTGTTGACCTAGAGGTATCCCTTCTTTATCCTGAATTTTTTCT 23610 Query 171990 TTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAAT 172049 ||||| | | || ||||| | || || || ||||| |||||||||||||| Sbjct 23609 TTTACGTAATAAATTGTATCACTAAAATCAACGCATATTGTAATACTTTTACCAGTTAAT 23550 Query 172050 GTTTTAATGAATATCTG 172066 |||| || |||||| || Sbjct 23549 GTTTGAACGAATATTTG 23533 >seq526 Length=44740 Score = 100 bits (110), Expect = 5e-16 Identities = 164/235 (70%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| | ||| | ||| || |||| ||||| ||||||||||||| Sbjct 29526 ATCCCACCACGTAGTCTAAGTACAAGATGCAACGTAGACTCTTCTTGAATATTATAATCT 29585 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| | | | || |||||||| |||||||||||||| | | || |||||||| Sbjct 29586 GATAAAGTTTTTCCATCCTCCAATTGCTTACCAGCAAAAATAATACGTTGCTGGTCAGGA 29645 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| | | | ||| ||| | || ||||| || || || Sbjct 29646 GGAATGCCTTCTTTTTTCTCGACCTTAGATTTAATCATATCAATAGTGTCGCTTGAATCA 29705 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTAT 172074 | ||||| ||| ||||| || || |||||||| | || || | | |||||| Sbjct 29706 AAATCTAGGATAACTGTTTTTCCGGTCAATGTTTTCA-CAAAATTTCCCTTTTAT 29759 >seq2455 Length=10122 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || | ||| | ||| | | | ||||||||||| | Sbjct 7206 ATACCACCTCTTAGACGGAGCACGAGATGAAGAGTTGATTTATCCCTAATATTATAATGT 7147 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| ||| || |||| ||||||||||||||| || || | || || | || Sbjct 7146 GTCAAAGTATGTTTATCTTCCAGTTGTTTACCAGCAAAGATCAAACGTTGCTGATTTGGA 7087 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || | |||||||||||||| ||| | ||||| || | | | ||||| || | || Sbjct 7086 GGAGTGCCTTCTTTATCTTGAATTATGTTTTTCACTTCTTTAACTGTATCAGAGGCATCA 7027 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | | ||| ||||| ||| ||| ||||||| || || || || Sbjct 7026 ACTTCAATGGCAATTGTTTTGCCACTTACAGTTTTAACAAAAATTTGTAT 6977 >seq322 Length=141587 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || |||||||||||||| ||||| || | |||||||||||| Sbjct 130981 ACCACCTCTTAATCTTAATACTAAATGTACAGTAGATTCATGTTGTATATTATAATCTTC 130922 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || || || || | ||||||||| || | || || | ||||| || || || Sbjct 130921 TAAAGTGCGATCATCTTCAAGTTGTTTACCGGCCATAAGCAAACGTTGTTGATCTGGAGG 130862 Query 171962 TATTCCTTCT 171971 ||| |||||| Sbjct 130861 TATACCTTCT 130852 >seq2251 Length=10798 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| || | || || || || ||||| | ||||||||||| || | Sbjct 7719 ATATTATAATCACTCAAGGTACGCTCATCTTCTAATTGACTTCCAGCAAAAATAAAACGT 7778 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG--TTATAG 172005 || ||||| || |||||||| || ||||| || || ||| || ||| | || | Sbjct 7779 TGACTATCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGCATTTAAC--TAGGCTGATGG 7836 Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 |||| ||||| ||||| || | || | ||||| || |||| |||||| | |||| || Sbjct 7837 TATCAGACGACTCTACCTCCAAGGTTACCGTTTTTCCGGTTAGTGTTTTTACAAATACCT 7896 Query 172066 GCAT 172069 |||| Sbjct 7897 GCAT 7900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905020006821600