Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=211661 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/163 (74%), Gaps = 10/163 (6%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGT--- 119552 ||||| || ||| | |||||||| ||||| || || || || ||| ||||| Sbjct 204948 GCAAAATCACAATGCAATCCTTCATCTCGAGAAATTAGTTCGTTG--GAA--AAAGTTAA 205003 Query 119553 -CCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGA-TGGCACAAAAACTTCCAGAAAAGA 119610 || ||||| | |||||||||||||| |||||||| || | | ||| | ||||||||||| Sbjct 205004 TCCTGGCATCATTCCTCTTTTCTTTAACCAAAAGATTGACGCGAAAGC-TCCAGAAAAGA 205062 Query 119611 AGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653 | || || || ||| ||| || || | ||||| |||||||| Sbjct 205063 ATATTCCTTCAACAGCGGCAAACGCTACAAGACGTTCAGCAAA 205105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588893035368200