Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2 212 1e-49 seq188 152 9e-32 seq157 145 1e-29 seq1319 140 6e-28 seq942 134 2e-26 seq2177 131 3e-25 seq2849 125 1e-23 seq364 100 5e-16 seq34 100 5e-16 seq1895 95.1 2e-14 seq432 86.0 1e-11 seq38 86.0 1e-11 seq97 84.2 4e-11 >seq2 Length=211661 Score = 212 bits (234), Expect = 1e-49 Identities = 359/509 (71%), Gaps = 11/509 (2%) Strand=Plus/Plus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || || || || |||||| || || |||||||| |||| ||| ||||| Sbjct 204653 TTTTTGATAATCTGATACGCGTTTTTCAAAGAAATTTGTTTTACCTTGTAAACTAATTAA 204712 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAA-TACATATA 38949 || |||||||||||| ||||| | | |||||| ||||| |||| | ||| | | || Sbjct 204713 ATCCATAAAATCAAAAGGATTCTCTGAATTATACAATTTTGCTCC-ACCAAGTGCCACTA 204771 Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATT-AATTCACAATTCATACCCAAT 39008 |||||||||| || |||||||||| ||||| | |||| ||||| | |||||||| | | Sbjct 204772 ATAATCTATCAGCTACAAATTCAATATATTTTTTCATTAAATTCGC-GTTCATACCAATT 204830 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagctt--gtttaa 39066 || |||| ||||||||| || | |||||||| ||||||| || |||| | | | Sbjct 204831 AAATTAACTGGTAATGCTTCTGTTAAAAATTCTTGTTCTATTGTAACCGCTTCCGCTATA 204890 Query 39067 ttatcataattatattattttttgataatttatatttaatatgattcgcatataGTAAAC 39126 || | | || | | ||| ||| | | || |||| | | ||| || | || Sbjct 204891 ATAGCTT--CTACAGTTTTTGTTGGAGGTCGTGCATGAAGATGAGT-GAATA-AG-AGAC 204945 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 |||||||||| ||| || ||||| || | ||| || | ||| || ||||||||||| Sbjct 204946 ATGCAAAATCACAATGCAATCCTTCATCTCGAGAAATTAGTTCGTTGGAAAAAGTTAATC 205005 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 ||||||| | |||||| || || | |||||| ||||| || ||| | ||||||||||| Sbjct 205006 CTGGCATCATTCCTCTTTTCTTTAACCAAAAGATTGACGCGAAAGCTCCAGAAAAGAATA 205065 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 | || || ||| ||||| |||| | | | | |||| ||| | ||| ||| Sbjct 205066 TTCCTTCAACAGCGGCAAACGCTACAAGACGTTCAGCAAATGAAGATTCCTTATCGGAAA 205125 Query 39307 TCCAATTTATGGCCCAATCTGCttttttt 39335 |||| | |||||||| ||||||||| Sbjct 205126 TCCATCGAAGAGCCCAATCCGCTTTTTTT 205154 Score = 114 bits (126), Expect = 2e-20 Identities = 185/262 (71%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 39417 GAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCT 39476 || |||||||| ||||| | | ||| || || |||||| |||||| |||||| Sbjct 205315 GAGTACATTTCTGAATGGATATTTTCGATCATGATCTGAAATCCATAAAAACATCTTGCT 205374 Query 39477 TCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCA 39536 |||| | || ||||| | || ||||| |||||||| ||| ||||||||||| Sbjct 205375 TCTGGAATTTGGACTTCATTACTAAAACGTTCCACTAAATTTTCATTGACAATACCATCC 205434 Query 39537 GATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTT 39596 || ||||| ||||| || ||||| | |||||| |||||| | ||| |||| ||| Sbjct 205435 GAGGCTGCAAAGAAGGCCAAAACGTGAGAAATAAAGAATTTTTCTTCATC-GTTAAGTTT 205493 Query 39597 ----TCCCAA-GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATG 39651 |||||| |||| | ||| || || | || ||||| || | |||||||| || | Sbjct 205494 ATACTCCCAATCATTC-ATATCCTTGGAAAGGTCAACTTCCTCAACAGTCCAAAATGAAG 205552 Query 39652 CTACGGATTTTTTATACATTTG 39673 || ||| ||||| |||||||| Sbjct 205553 CTTCGGCCTTTTTGTACATTTG 205574 >seq188 Length=104369 Score = 152 bits (168), Expect = 9e-32 Identities = 168/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 171860 TACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATC 171919 ||| || ||||| || | ||||| |||||| ||||| || | || ||| | || || Sbjct 83272 TACCAAGTGTAATGTTGATTCTTTTTGAATATTGTAATCGGAAAGTGAACGTCCATCTTC 83213 Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 || |||||||||||||| ||||| | ||||| || || || ||||||||||||||||| Sbjct 83212 TAACTGTTTACCAGCAAATATTAAACGTTGTTGATCCGGGGGGATTCCTTCTTTATCTTG 83153 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 ||||| | ||| || ||| || ||||| ||| ||||||| |||||||||||| Sbjct 83152 AATTTTTTCTTTGACTTTATCGATGGTATCGCTACTTTCAACTTCTAAAGTAATGGTTTT 83093 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAAAAA 172082 |||||| | |||||||| || || ||||| | ||| ||||| Sbjct 83092 ACCAGTAAGTGTTTTAACAAAAATTTGCATGT--TTAAAAAAA 83052 >seq157 Length=142614 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||||||||||||| Sbjct 36720 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 36661 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || ||||||||||||||||| || ||||| | ||||| || || Sbjct 36660 GACAAAGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATTAAGCGTTGTTGATCTGGA 36601 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| |||||||| || || ||| || | | || ||||| || || Sbjct 36600 GGAATTCCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCAATGGTATCATTGGACTCG 36541 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || ||||||||||| ||||| | || || | |||||| ||||| Sbjct 36540 ACTTCAAGGGTAATGGTTTTCCCAGTAAGGGTCTTGACGAATATTTGCAT 36491 Score = 136 bits (150), Expect = 7e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||| || | ||| | ||| | ||||| ||||| |||||||||||| || Sbjct 37630 ACCACCCCGAAGACGAAGTACGAGATGGAGAGTAGATTCTTTTTGAATATTATAATCCGA 37571 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || | || ||||||||||||||||| || || || | || || || || || Sbjct 37570 TAAAGTACGACCATCTTCCAATTGTTTACCAGCGAAGATCAAGCGTTGCTGATCTGGAGG 37511 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTCTA 172020 || ||||| |||||||| || || | |||| || || ||| ||||| || || || | Sbjct 37510 AATACCTTCCTTATCTTGAATCTT-TGCTTTAACTTGGTCTATGGTATCAGAGGACTCAA 37452 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| || ||||| |||||||| || | || || | ||| || ||||| Sbjct 37451 CTTCAAGGGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 37403 Score = 125 bits (138), Expect = 1e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | || || ||||||||| || Sbjct 37404 ATACCACCTCTTAAGCGAAGTACGAGATGGAGAGTTGATTCCTTTTGAATATTATAGTCC 37345 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || |||||||||||||| || || || || | ||||| || || Sbjct 37344 GATAAAGTACGGCCATCTTCCAATTGTTTACCGGCGAAGATCAAGCGTTGTTGATCTGGG 37285 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || ||| || | | ||| ||||| || || || Sbjct 37284 GGGATACCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCTATGGTATCAGAGGACTCG 37225 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATAT 172063 ||||| |||||||| |||||||| || | || || | ||| || Sbjct 37224 ACTTCAAGAGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAAT 37181 Score = 89.7 bits (98), Expect = 9e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||||||| || | ||| | ||| | ||| | |||||| ||| || ||||| Sbjct 36492 ATACCACCTCTAAGACGGAGTACGAGATGAAGAGTTGACTCTTTCTGAATGTTGTAATCA 36433 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| ||| |||| ||||| ||||| || ||||| ||||| | ||||| || || Sbjct 36432 GATAAGCTACGTCCGTCTTCCAACTGTTTTCCGGCAAAGATTAAGCGTTGTTGATCCGGA 36373 Query 171960 GGTATTCCT 171968 || |||||| Sbjct 36372 GGAATTCCT 36364 >seq1319 Length=24104 Score = 140 bits (154), Expect = 6e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || | ||| | ||| | |||||| ||||| |||||| Sbjct 16837 ATACCACCTCTTAAACGGAGCACGAGATGGAGAGTTGACTCTTTTTGGATATTGTAATCT 16778 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| | || |||||||||||||| ||||| || || | || || || || Sbjct 16777 GACAAGGTACGTCCATCTTCCAATTGTTTACCGGCAAAGATCAAGCGTTGCTGATCCGGG 16718 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || |||||||| ||||| || || ||| || || || || |||||||| || || Sbjct 16717 GGAATGCCTTCTTTGTCTTGAATCTTCGCTTTAAC-TTGGTCAATGGTATCTGAGGACTC 16659 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| |||||||| |||||||| || | || |||| ||| || ||||| Sbjct 16658 TACTTCAAGAGTAATAGTTTTACCGGTAAGAGTCTTAACGAAAATTTGCAT 16608 Score = 100 bits (110), Expect = 5e-16 Identities = 112/148 (76%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||| ||||||||||| ||||| ||||| || || || || |||||||| ||||| || Sbjct 16981 TGTTTGCCAGCAAAAATCAATCTTTGTTGATCTGGAGGGATACCTTCTTTGTCTTGAATC 16922 Query 171984 TTATTTTTTACATTAGTT--ATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTAC 172041 || | || || | ||| || ||||| || ||||| ||||| |||||||| ||||| | Sbjct 16921 TTTGTCTTGAC--TTGTTCAATTGTATCAGAAGATTCAACTTCAAGAGTAATAGTTTTCC 16864 Query 172042 CAGTTAATGTTTTAATGAATATCTGCAT 172069 | || | || || | || |||||||| Sbjct 16863 CGGTGAGGGTCTTTACAAAAATCTGCAT 16836 >seq942 Length=78137 Score = 134 bits (148), Expect = 2e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| || | || |||||||||||||| || | ||| | | | ||||| ||||| | Sbjct 25471 CCACCCCTTAATCTTAATACTAAATGTAGCGTGGACTCATCACATATATTGTAATCACTT 25412 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| || | || || | ||| |||||||||||||||||||| ||||| || |||||| Sbjct 25411 AAAGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGT 25352 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || |||||||| || ||||| |||||| | | || ||||| | || ||| Sbjct 25351 ATACCTTCTTTTTCAGTAATTTTTGTTTTTAATTGATCAATTGTATCACTAAACTCGACT 25292 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 172056 || | || || ||||| |||||||||||||||| Sbjct 25291 TCAATTGTTATAGTTTTTCCAGTTAATGTTTTAA 25258 >seq2177 Length=17275 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | |||||| | ||||| ||| | ||| | |||||| ||| ||||||||| Sbjct 3974 ATACCTCCGCGAAGTCGAAGTACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCT 3915 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| ||||| ||||| | | || ||||| || Sbjct 3914 GAGAGGGTACGGCCGTCTTCAAGTTGTTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGG 3855 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || ||||||||||| ||||| ||||| | |||| || || ||||| || || ||||| Sbjct 3854 GGAATTCCTTCTTTGTCTTGAATTTT-TGCTTTAACTTGGTCAATAGTGTCGGAAGATTC 3796 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || || || || || | ||||||| ||| || ||||| Sbjct 3795 AACTTCAAGGGTGATTGTCTTTCCGGTAAGGGTTTTAACGAAGATTTGCAT 3745 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || ||||| | || | |||||| |||||| || || Sbjct 4430 ATACCACCACGAAGACGAAGCACCAAATGAAGTGTTGACTCTTTTTGAATATTGTAGTCA 4371 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | ||||||||| || ||||| | | || || || || Sbjct 4370 GAAAGGGTTCGTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGG 4311 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| || || |||||| | | || ||||| || || || Sbjct 4310 GGAATACCTTCTTTGTCTTGGATCTTTGCTTTTACTTGATCGATGGTATCGGAAGACTCA 4251 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||||||| ||||| | ||||||| || || ||||| Sbjct 4250 ACTTCCAAAGTAATGGTTTTTCCAGTGAGAGTTTTAACAAAAATTTGCAT 4201 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| || | || || | || |||||||| |||||||| ||||| || | Sbjct 4610 ATGTTATAATCCGAAAGAGTACGACCATCTTCCAATTGCTTACCAGCGAAAATCAAACGT 4551 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || || || || || ||||||||||| ||||| |||| || | | || ||| Sbjct 4550 TGCTGATCTGGAGGGATACCCTCTTTATCTTGAATTTTGGTTTTAACCTGATCAATGGTA 4491 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||||| || || || ||||| || |||||||| | |||||| | || || ||| Sbjct 4490 TCAGATGATTCGACCTCAAGGGTAATCGTCTTACCAGTAAGTGTTTTTACAAAAATTTGC 4431 Query 172068 AT 172069 || Sbjct 4430 AT 4429 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || | ||| | ||| | ||||| |||||| || || Sbjct 4202 ATACCACCACGAAGACGGAGAACGAGATGAAGAGTGGATTCTTTTTGAATATTGTAGTCG 4143 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | |||||||||||| ||||| | | || ||||| || Sbjct 4142 GAAAGGGTTCGTCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGTTGCTGGTCTGGG 4083 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || || || |||||||| ||||| ||||||| || || || ||||| || || || Sbjct 4082 GGGATACCCTCCTTATCTTGAATTTTGGTTTTTAC-TTGGTCGATGGTATCCGAGGACTC 4024 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| || | || |||||||| || || | || || | ||| || ||||| Sbjct 4023 TACGTCCAAGGTGATGGTTTTGCCGGTGAGCGTCTTTACGAAGATTTGCAT 3973 >seq2849 Length=14001 Score = 125 bits (138), Expect = 1e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | |||| ||||||| ||||| || | ||||| ||| ||||| ||| Sbjct 4196 CCACCAGTTAGTCTCAATACTATATGTATTGTGGATTCTTTTTTTATACCGTAATCCGAT 4137 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 || | || | || || | | ||||||||||||||||||| ||||| || | ||| Sbjct 4136 AACGTACGGCCATCTTCAAGTGACATACCAGCAAAAATTAATCTTTGTTGATCTAGAGGT 4077 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || | ||||||||| || ||||| | ||||| ||| || ||||| | | || | Sbjct 4076 ATCCTTTCTTTATCCTGAATTTTTTCTTTTAGGTTATAAATTGTATCACTAAAATTTAAT 4017 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||||| || || |||||||||||||||||||||| |||||| || Sbjct 4016 TCTAGTGTTATAGTTTTACCAGTTAATGTTTTAACGAATATTTG 3973 >seq364 Length=140482 Score = 100 bits (110), Expect = 5e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| | ||| | ||| || |||| |||| | ||||||||||||| Sbjct 20941 ATCCCACCACGTAGTCTAAGTACAAGATGCAACGTAGACTCTCTTTGAATATTATAATCT 21000 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| | | | || |||||||| |||||||||||||| | | || |||||||| Sbjct 21001 GATAAAGTTTTTCCATCCTCCAATTGCTTACCAGCAAAAATAATACGTTGCTGGTCAGGA 21060 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| | | | ||| ||| | || ||||| || || || Sbjct 21061 GGAATGCCTTCTTTTTTCTCGACCTTAGATTTAATCATATCAATAGTGTCGCTTGAATCA 21120 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTAT 172074 | ||||| ||| ||||| || || | |||||| | || || | | |||||| Sbjct 21121 AAATCTAGGATAACTGTTTTTCCGGTCATTGTTTTCACAAAAATTTCCCTTTTAT 21175 >seq34 Length=176868 Score = 100 bits (110), Expect = 5e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 |||| ||||||||| || | ||| |||| || |||||| | ||||||||||| | | Sbjct 50779 ATATGATAATCTGACAAGGTACGTCCGTCTTCTAATTGTATGCCAGCAAAAATAAGGCGT 50838 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 ||||| ||||| || ||||||||||| || | || ||| |||| | || || ||| Sbjct 50839 TGTTGATCAGGAGGAATTCCTTCTTTGTCATTAATCTTACTTTTAAGTTTGTCAATTGTA 50898 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || ||| || || | || || ||||| ||||||| |||||| | ||||||||| Sbjct 50899 TCACTCGAAGTCACCTCCAATGTTATTGTTTTTCCAGTTAGTGTTTTCACAAATATCTGC 50958 >seq1895 Length=14547 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || | ||| | ||| | | | ||||||||||| | Sbjct 4252 ATACCACCTCTTAGACGGAGCACGAGATGAAGAGTTGATTTATCCCTAATATTATAATGT 4193 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| ||| || |||| ||||||||||||||| || || | || || | || Sbjct 4192 GTCAAAGTATGTTTATCTTCCAGTTGTTTACCAGCAAAGATCAAACGTTGCTGATTTGGA 4133 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || | |||||||||||||| ||| | ||||| || | | | ||||| || | || Sbjct 4132 GGAGTGCCTTCTTTATCTTGAATTATGTTTTTCACTTCTTTAACTGTATCAGAGGCATCA 4073 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | | ||| ||||| ||| ||| ||||||| || || || || Sbjct 4072 ACTTCAATGGCAATTGTTTTGCCACTTACAGTTTTAACAAAAATTTGTAT 4023 >seq432 Length=103261 Score = 86.0 bits (94), Expect = 1e-11 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | | || |||| | || ||| || | ||||| || || ||||| || Sbjct 93811 ACCACCACGTAATCTCAATATAAGATTTAATGTGGATTCTTTTTTTATCTTGTAATCCGA 93752 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | | || || || | | | |||||| |||||||| | ||||| | | || Sbjct 93751 TAACGTACAATCATCTTCAAGTAACATTCCAGCATAAATTAATTTTTGTTGACCTAGAGG 93692 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||| ||||||||||| || ||||| | |||||| | | || ||||| | || || Sbjct 93691 TATCCCTTCTTTATCCTGAATTTTTTCTTTTACGTAATAAATTGTATCACTAAAATCAAC 93632 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || ||||| |||||||||||||||||| || |||||| || Sbjct 93631 GCATATTGTAATACTTTTACCAGTTAATGTTTGAACGAATATTTG 93587 >seq38 Length=163822 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || |||||||||||||| ||||| || | |||||||||||| Sbjct 74642 ACCACCTCTTAATCTTAATACTAAATGTACAGTAGATTCATGTTGTATATTATAATCTTC 74583 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || || || || | ||||||||| || | || || | ||||| || || || Sbjct 74582 TAAAGTGCGATCATCTTCAAGTTGTTTACCGGCCATAAGCAAACGTTGTTGATCTGGAGG 74523 Query 171962 TATTCCTTCT 171971 ||| |||||| Sbjct 74522 TATACCTTCT 74513 >seq97 Length=146771 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| || | || || || || |||||| | ||||||||||| || | Sbjct 24407 ATATTATAATCACTCAAGGTACGCTCATCTTCTAATTGTCTTCCAGCAAAAATAAAACGT 24348 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG--TTATAG 172005 || | ||| || |||||||| || ||||| || || ||| || ||| | || | Sbjct 24347 TGACTATTAGGAGGAATTCCTTCCTTGTCTTGGATCTTGCATTTAAC--TAGGCTGATGG 24290 Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 |||| ||||| ||||| || | || | ||||| || |||| |||||| | |||| || Sbjct 24289 TATCAGACGACTCTACCTCCAAGGTTACCGTTTTTCCGGTTAGTGTTTTTACAAATACCT 24230 Query 172066 GCAT 172069 |||| Sbjct 24229 GCAT 24226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905008500280200