Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2177 102 8e-17 >seq2177 Length=17275 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| ||||| || |||||||| ||| | || | | | ||||| || || || || Sbjct 4169 GTGGATTCTTTTTGAATATTGTAGTCGGAAAGGGTTCGTCCA-TCCTCAAGTTGTTTACC 4111 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| || |||||||| || ||||| || ||||| || ||| ||| | || Sbjct 4110 AGCGAAAATGAGACGTTGCTGGTCTGGGGGGATACCCTCCTTATCT-TGAATTTTGGTTT 4052 Query 133583 GAGCT-GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 || | || | || || | || ||| ||||| | ||||| |||||||||||| || | Sbjct 4051 TTACTTGGTCGATGGTATCCGAGGACTCTACGTCCAAGGTGATGGTTTTGCCGGTGAGCG 3992 Query 133642 TTTTTACGAAAATCTGCAT 133660 | |||||||| || ||||| Sbjct 3991 TCTTTACGAAGATTTGCAT 3973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483352704137560