Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593155.1_202016-03- 16] 10,735 sequences; 122,873,294 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq114 84.2 3e-11 >seq114 Length=70618 Score = 84.2 bits (92), Expect = 3e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 107153 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 107212 |||||||| ||||| || |||||||||||||||||||| || | ||||| |||| ||| Sbjct 58233 AAGCAACTTGACATTTGTGGTCTTGGTGTACCAGCATTAAACAAAGTTGGACTTGCATGA 58174 Query 107213 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271 | || ||| | | |||||| | || || || | | | |||||| || | || Sbjct 58173 GT-AAAATATTTCTCGGACATTAAATTATAAGTTTCAATAGCTGCATCAATATCATAACC 58115 Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTC 107316 || || || || | |||||||| ||||||| ||| ||| |||| Sbjct 58114 ATGAATTCCAATAGAAACACGCATCAACATGTGTTGTGGTCTTTC 58070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589901631951400