Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593155.1_202016-03- 16] 10,735 sequences; 122,873,294 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq202 149 5e-31 seq865 140 3e-28 seq498 140 3e-28 seq2141 136 3e-27 seq1933 104 2e-17 seq1345 95.1 1e-14 seq6 89.7 4e-13 seq446 87.8 1e-12 seq644 86.0 5e-12 >seq202 Length=70977 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||| | || | ||| || || ||||| ||||| ||||| || || | Sbjct 31292 CCACCTCTTAAACGAAGTACGAGATGGAGAGTTGATTCCTTTTGAATATTATAGTCCGAT 31233 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| |||||||| ||||| || || ||||| || |||||||| || || Sbjct 31232 AAAGTACGGCCATCTTCCAATTGTTTACCGGCGAAGATCAAGCGTTGTTGATCTGGGGGG 31173 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||||||||| ||| ||| || |||| || ||||| | || ||| Sbjct 31172 ATACCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCTATGGTATCAGAGGACTCGACT 31113 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | ||||| ||||| | ||| || || || || ||||| Sbjct 31112 TCAAGAGTAATTGTTTTACCGGTGAGAGTCTTGACGAAAATTTGCAT 31066 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||| | || | ||| || || ||||||||||| || || || || | Sbjct 30836 CCACCTCTTAAACGGAGTACGAGATGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAC 30777 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || ||||| ||||| || || ||||| || |||||||| || || Sbjct 30776 AATGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGGGGG 30717 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||||||||| ||| ||| || |||| || ||||| | || ||| Sbjct 30716 ATACCTTCTTTATCTTGAATCTTTGCTTTAACTTGGTCTATGGTATCAGAGGACTCTACT 30657 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| ||||| ||||| | ||||| || || || ||||| Sbjct 30656 TCAAGAGTGATTGTTTTACCGGTCAGCGTTTTAACGAAAATTTGCAT 30610 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||| | || | ||| || || ||||||||||| ||||| ||||| | Sbjct 31064 CCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCTGAC 31005 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || ||||| ||||| || || ||||| || |||||||| || || Sbjct 31004 AACGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGAGGG 30945 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||||||||| || |||||| |||| || ||||| | || ||| Sbjct 30944 ATACCTTCTTTATCTTGAATCTTCGTTTTTACTTGATCTATGGTATCAGAGGACTCGACT 30885 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | ||||| ||||| | || || || || || ||||| Sbjct 30884 TCAAGAGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 30838 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||| | || | ||| || || ||||||||||| ||||| ||||| | Sbjct 30608 CCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCTGAC 30549 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| |||||||| ||||| || || || || || |||||||| || ||| Sbjct 30548 AAAGTACGCCCATCTTCCAATTGTTTACCAGCGAAGATTAAGCGTTGTTGATCTGGAGGA 30489 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||||||||| ||| ||| || || | ||| ||| | || ||| Sbjct 30488 ATTCCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCAATAGTATCATTGGACTCGACT 30429 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | ||||| || || | || || || ||||| ||||| Sbjct 30428 TCAAGGGTAATGGTTTTCCCAGTAAGGGTCTTGACGAATATTTGCAT 30382 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || |||||||||||||| ||||| ||||| | | ||| | |||| |||||||| Sbjct 31497 ATGGAGAGTAGATTCTTTTTGAATATTATAATCCGATAAAGTACGACCATCTTCCAATTG 31438 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||||| || || ||||| || || ||||| || ||||| ||||| ||||||||||| || Sbjct 31437 TTTACCAGCGAAGATCAAGCGTTGCTGATCTGGAGGAATACCTTCCTTATCTTGAATCTT 31378 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | ||| || |||| || ||||| | || |||||||| || | ||||| ||||| Sbjct 31377 TGCTTTAACTTGGTCTATGGTATCAGAGGACTCAACTTCAAGGGTAATTGTTTTACCGGT 31318 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || || || || ||||| Sbjct 31317 GAGGGTCTTGACGAAAATTTGCAT 31294 >seq865 Length=39574 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||| | || | ||| || || || || ||||| ||||||||||| | Sbjct 10189 CCACCTCTTAAACGGAGCACGAGATGGAGAGTTGACTCCTTTTGGATATTGTAATCTGAC 10130 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct 10129 AAGGTACGTCCATCTTCCAATTGTTTACCGGCAAAGATCAAGCGTTGCTGATCCGGGGGA 10070 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||| |||||||| || ||| || || | || || || | || ||| Sbjct 10069 ATGCCTTCTTTGTCTTGAATCTTCGCTTTAACTTGGTCAATGGTATCTGAGGACTCTACT 10010 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | ||||| ||||| | ||| || || || || ||||| Sbjct 10009 TCAAGAGTAATAGTTTTACCGGTAAGAGTCTTAACGAAAATTTGCAT 9963 Score = 102 bits (112), Expect = 6e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383 || || || ||||| ||||| | |||||||| || || || |||||||| |||||||| Sbjct 10336 TGTTTGCCAGCAAAAATCAATCTTTGTTGATCTGGAGGGATACCTTCTTTGTCTTGAATC 10277 Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443 ||| || || ||| | || ||||| | ||| ||||||||||| | ||||| ||| Sbjct 10276 TTTGTCTTGACTTGTTCAATTGTATCAGAAGATTCAACTTCAAGAGTAATAGTTTTCCCG 10217 Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469 || | || |||||||| |||||||| Sbjct 10216 GTGAGGGTCTTTACAAAAATCTGCAT 10191 >seq498 Length=39471 Score = 140 bits (154), Expect = 3e-28 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | |||||| | || || || | || ||||||||||| ||||||||||||| Sbjct 34890 CCACCGCGTAAACGAAGTACCAAGTGTAATGTTGATTCTTTTTGAATATTGTAATCGGAA 34831 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | | | |||| || || || ||||| |||||||| ||||| |||||||| || || Sbjct 34830 AGTGAACGTCCATCTTCTAACTGTTTACCAGCAAATATTAAACGTTGTTGATCCGGGGGG 34771 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||||||||||| ||| || | || | || || |||| ||| Sbjct 34770 ATTCCTTCTTTATCTTGAATTTTTTCTTTGACTTTATCGATGGTATCGCTACTTTCAACT 34711 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTA 101474 || | ||| | ||||| || || | ||||| ||||| || |||||| ||| Sbjct 34710 TCTAAAGTAATGGTTTTACCAGTAAGTGTTTTAACAAAAATTTGCATGTTTA 34659 >seq2141 Length=12878 Score = 136 bits (150), Expect = 3e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || ||||||||||| || || ||||| | | ||| | |||| ||||||||| Sbjct 5790 TGAAGAGTTGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGACCATCTTCCAATTGC 5731 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || |||||||| || ||||| || || || || ||||||||||||||||| Sbjct 5730 TTACCAGCGAAAATCAAACGTTGCTGATCTGGAGGGATACCCTCTTTATCTTGAATTTTG 5671 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || || | || ||||| | ||| || ||||| || | ||| || || || Sbjct 5670 GTTTTAACCTGATCAATGGTATCAGATGATTCGACCTCAAGGGTAATCGTCTTACCAGTA 5611 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||||||||| || ||||| Sbjct 5610 AGTGTTTTTACAAAAATTTGCAT 5588 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||| |||||| || || |||||||| || || ||||| | | || | | || || Sbjct 5112 ACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGAAAGGGTACGACCGTCTTCA 5053 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| || || || || || | ||| || || || || ||||| |||||||| |||||| Sbjct 5052 AGTTGTTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGA 4993 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 |||||| ||| || || | |||||| || | ||| |||||||| |||| || || Sbjct 4992 ATTTTTGCTTTAACTTGGTCAATAGTGTCGGAAGATTCAACTTCAAGGGTGATTGTCTTT 4933 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 ||||| | ||||| || || || |||||| || Sbjct 4932 CCGGTAAGGGTTTTAACGAAGATTTGCATGATT 4900 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | |||||| || ||||||||||| |||||||| |||| | |||| | Sbjct 5347 ACGGAGAACGAGATGAAGAGTGGATTCTTTTTGAATATTGTAGTCGGAAAGGGTTCGTCC 5288 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||| ||||| || || || | ||| || || || || || || || || || Sbjct 5287 ATCCTCAAGTTGTTTACCAGCGAAAATGAGACGTTGCTGGTCTGGGGGGATACCCTCCTT 5228 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||||||||| |||||| || | || || || | || || || | |||| Sbjct 5227 ATCTTGAATTTTGGTTTTTACTTGGTCGATGGTATCCGAGGACTCTACGTCCAAGGTGAT 5168 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481 ||||||||||| | || ||||| || || ||||| | ||||||| Sbjct 5167 GGTTTTGCCGGTGAGTGTCTTTACGAAGATTTGCATACCTCCGCGAAG 5120 >seq1933 Length=16258 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||| ||| | || | |||||| || |||| | ||||| |||| | Sbjct 4013 CCACCTCTTAGACGGAGCACGAGATGAAGAGTTGATTTATCCCTAATATTATAATGTGTC 3954 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| ||| |||| ||| ||||| ||||| |||||||| || |||| || ||| Sbjct 3953 AAAGTATGTTTATCTTCCAGTTGTTTACCAGCAAAGATCAAACGTTGCTGATTTGGAGGA 3894 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||||||||||||||| | | ||| || || || || || || | || ||| Sbjct 3893 GTGCCTTCTTTATCTTGAATTATGTTTTTCACTTCTTTAACTGTATCGGAGGCATCAACT 3834 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | | |||||||| ||| |||||| ||||| || || || Sbjct 3833 TCAATGGCAATTGTTTTGCCACTTACAGTTTTAACAAAAATTTGTAT 3787 >seq1345 Length=28361 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || ||||| || ||||| ||||| | || | |||| || ||||| Sbjct 3641 ATGAAGTGTGCTCTCTTTCTGGATATTATAATCACTCAAGGTACGCCCATCTTCTAATTG 3582 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| || | ||| |||| ||| || | ||| ||||| ||||||||||| | Sbjct 3581 TTTTCCAGCAAAAATAAGACGTTGTTTATCAGGAGCAATTCCTTCCTTATCTTGAATCCT 3522 Query 101386 TTGTTTTACAATT---TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 ||| |||| | | || ||||||| || || || | || |||||||| || Sbjct 3521 GACTTT---AATTTGGTTAATGGTATCAGACGACTCTACCTCCAAGGTTACCGTTTTTCC 3465 Query 101443 GGTTAAAGTTTTTACAAATATCTGCATGG 101471 | ||| ||||||||||||| |||||||| Sbjct 3464 GATTAGTGTTTTTACAAATACCTGCATGG 3436 >seq6 Length=229349 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || ||||| | ||| |||||||| || || || || |||||||||||| Sbjct 13959 CCACCCCTTAATCTTAATACTAAATGTAGCGTGGACTCAACACATATATTGTAATCACTT 14018 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||||||||| ||||| || || | |||||||| || || Sbjct 14019 AAAGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGT 14078 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT--TCTACAGTGTCAGACGTTTCCA 101420 || |||||||| || | | |||||||||| |||| || | || ||| || | Sbjct 14079 ATACCTTCTTTTTC-AGTAATTTTTGTTTT-TAATTGATCAATTGTATCACTAAACTCGA 14136 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457 |||||| || | ||||| || ||||| ||||| || Sbjct 14137 CTTCAATTGTTAGAGTTTTTCCAGTTAATGTTTTAAC 14173 >seq446 Length=157017 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 ||||| |||| ||| ||||| |||| | | |||| | |||| |||||||||||||| Sbjct 26244 GTAGACTCTTCTTGAATATTACAATCTGATAAAGTTTTTCCATCCTCCAATTGCTTACCA 26185 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 ||||| || | ||| || || || || |||||||||||||| | | | || ||| Sbjct 26184 GCAAAAATAATACGTTGCTGGTCAGGAGGAATGCCTTCTTTTTTCTCGACCTTAGATTTA 26125 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 | || || | |||||| | || | || || | || ||||| ||||| || ||| Sbjct 26124 ATCATATCAATAGTGTCGCTTGAATCAAAATCTAGGATAACTGTTTTTCCGGTCAATGTT 26065 Query 101453 TTTACAAATAT 101463 || ||||| || Sbjct 26064 TTCACAAAAAT 26054 >seq644 Length=44625 Score = 86.0 bits (94), Expect = 5e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383 || ||||| ||||| ||||||||||||||||| || || || ||||||||||||||||| Sbjct 27765 TGTTTACCGGCAAAAATCAAACGCTGTTGATCTGGAGGGATACCTTCTTTATCTTGAATC 27706 Query 101384 TTTTGTTTTACA 101395 ||||| || ||| Sbjct 27705 TTTTGCTTAACA 27694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396226553782395