Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593155.1_202016-03- 16] 10,735 sequences; 122,873,294 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq717 206 5e-48 seq498 152 9e-32 seq202 149 1e-30 seq865 134 2e-26 seq2141 131 3e-25 seq6 125 1e-23 seq398 122 2e-22 seq446 100 5e-16 seq1933 95.1 2e-14 seq1187 86.0 1e-11 seq1345 84.2 4e-11 >seq717 Length=48811 Score = 206 bits (228), Expect = 5e-48 Identities = 358/509 (70%), Gaps = 11/509 (2%) Strand=Plus/Minus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || || || || |||||| || || |||||||| |||| ||| ||||| Sbjct 5103 TTTTTGATAATCTGATACGCGTTTTTCAAAGAAATTTGTTTTACCTTGTAAACTAATTAA 5044 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAA-TACATATA 38949 || |||||||||||| ||||| | | |||||| ||||| |||| | ||| | | || Sbjct 5043 ATCCATAAAATCAAAAGGATTCTCTGAATTATACAATTTTGCTCC-ACCAAGTGCCACTA 4985 Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATT-AATTCACAATTCATACCCAAT 39008 |||||||||| || |||||||||| ||||| | |||| ||||| | |||||||| | | Sbjct 4984 ATAATCTATCAGCTACAAATTCAATATATTTTTTCATTAAATTCGC-GTTCATACCAATT 4926 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagctt--gtttaa 39066 || |||| ||||||||| || | |||||||| ||||||| || |||| | | | Sbjct 4925 AAATTAACTGGTAATGCTTCTGTTAAAAATTCTTGTTCTATTGTAACCGCTTCCGCTATA 4866 Query 39067 ttatcataattatattattttttgataatttatatttaatatgattcgcatataGTAAAC 39126 || | | || | | ||| ||| | || |||| | | ||| || | || Sbjct 4865 ATAGCTT--CTACAGTTTTTGTTGGAGGTCGTGCACGAAGATGAGT-GAATA-AG-AGAC 4811 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 |||||||||| ||| || ||||| || | ||| || | ||| || ||||||||||| Sbjct 4810 ATGCAAAATCACAATGCAATCCTTCATCTCGAGAAATTAGTTCGTTGGAAAAAGTTAATC 4751 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 ||||||| | |||||| || || | |||||| ||||| || ||| | ||||||||||| Sbjct 4750 CTGGCATCATTCCTCTTTTCTTTAACCAAAAGATTGACGCGAAAGCTCCAGAAAAGAATA 4691 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 | || || ||| ||||| |||| | | | | |||| ||| | ||| ||| Sbjct 4690 TTCCTTCAACAGCGGCAAACGCTACAAGACGTTCAGCAAATGAAGATTCCTTATCGGAAA 4631 Query 39307 TCCAATTTATGGCCCAATCTGCttttttt 39335 |||| | |||||||| ||||||||| Sbjct 4630 TCCATCGAAGAGCCCAATCCGCTTTTTTT 4602 Score = 109 bits (120), Expect = 1e-18 Identities = 184/262 (70%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 39417 GAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCT 39476 || |||||||| ||||| | | ||| || || |||||| |||||| |||||| Sbjct 4441 GAGTACATTTCTGAATGGATATTTTCGATCATGATCTGAAATCCATAAAAACATCTTGCT 4382 Query 39477 TCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCA 39536 |||| | || ||||| | || ||||| |||||||| ||| ||||||||||| Sbjct 4381 TCTGGAATTTGGACTTCATTACTAAAACGTTCCACTAAATTTTCATTGACAATACCATCC 4322 Query 39537 GATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTT 39596 || || || ||||| || ||||| | |||||| |||||| | ||| |||| ||| Sbjct 4321 GAGGCGGCAAAGAAGGCCAAAACGTGAGAAATAAAGAATTTTTCTTCATC-GTTAAGTTT 4263 Query 39597 ----TCCCAA-GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATG 39651 |||||| |||| | ||| || || | || ||||| || | |||||||| || | Sbjct 4262 ATACTCCCAATCATTC-ATATCCTTGGAAAGGTCAACTTCCTCAACAGTCCAAAATGAAG 4204 Query 39652 CTACGGATTTTTTATACATTTG 39673 || ||| ||||| |||||||| Sbjct 4203 CTTCGGCCTTTTTGTACATTTG 4182 >seq498 Length=39471 Score = 152 bits (168), Expect = 9e-32 Identities = 168/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 171860 TACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATC 171919 ||| || ||||| || | ||||| |||||| ||||| || | || ||| | || || Sbjct 34873 TACCAAGTGTAATGTTGATTCTTTTTGAATATTGTAATCGGAAAGTGAACGTCCATCTTC 34814 Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 || |||||||||||||| ||||| | ||||| || || || ||||||||||||||||| Sbjct 34813 TAACTGTTTACCAGCAAATATTAAACGTTGTTGATCCGGGGGGATTCCTTCTTTATCTTG 34754 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 ||||| | ||| || ||| || ||||| ||| ||||||| |||||||||||| Sbjct 34753 AATTTTTTCTTTGACTTTATCGATGGTATCGCTACTTTCAACTTCTAAAGTAATGGTTTT 34694 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAAAAA 172082 |||||| | |||||||| || || ||||| | ||| ||||| Sbjct 34693 ACCAGTAAGTGTTTTAACAAAAATTTGCATGT--TTAAAAAAA 34653 >seq202 Length=70977 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||||||||||||| Sbjct 30611 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 30552 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || ||||||||||||||||| || ||||| | ||||| || || Sbjct 30551 GACAAAGTACGCCCATCTTCCAATTGTTTACCAGCGAAGATTAAGCGTTGTTGATCTGGA 30492 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| |||||||| || || ||| || | | |||||||| || || Sbjct 30491 GGAATTCCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCAATAGTATCATTGGACTCG 30432 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || ||||||||||| ||||| | || || | |||||| ||||| Sbjct 30431 ACTTCAAGGGTAATGGTTTTCCCAGTAAGGGTCTTGACGAATATTTGCAT 30382 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||||||||||||| Sbjct 31067 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 31008 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || |||||||||||||| || || || | ||||| || || Sbjct 31007 GACAACGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGA 30948 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| || || ||||||| | | ||| ||||| || || || Sbjct 30947 GGGATACCTTCTTTATCTTGAATCTTCGTTTTTACTTGATCTATGGTATCAGAGGACTCG 30888 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| |||||||| || | || || | ||| || ||||| Sbjct 30887 ACTTCAAGAGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 30838 Score = 140 bits (154), Expect = 6e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||| ||||| ||| Sbjct 30839 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTGGATTCTTTTTGAATGTTATAGTCT 30780 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || |||||||||||||| || || || | ||||| || || Sbjct 30779 GACAATGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGG 30720 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || |||||||||||||| || || | |||| || || ||| ||||| || || || Sbjct 30719 GGGATACCTTCTTTATCTTGAATCTT-TGCTTTAACTTGGTCTATGGTATCAGAGGACTC 30661 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| ||||| || |||||||| || | ||||||| ||| || ||||| Sbjct 30660 TACTTCAAGAGTGATTGTTTTACCGGTCAGCGTTTTAACGAAAATTTGCAT 30610 Score = 136 bits (150), Expect = 7e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||| || | ||| | ||| | ||||| ||||| |||||||||||| || Sbjct 31521 ACCACCCCGAAGACGAAGTACGAGATGGAGAGTAGATTCTTTTTGAATATTATAATCCGA 31462 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || | || ||||||||||||||||| || || || | || || || || || Sbjct 31461 TAAAGTACGACCATCTTCCAATTGTTTACCAGCGAAGATCAAGCGTTGCTGATCTGGAGG 31402 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTCTA 172020 || ||||| |||||||| || || | |||| || || ||| ||||| || || || | Sbjct 31401 AATACCTTCCTTATCTTGAATCTT-TGCTTTAACTTGGTCTATGGTATCAGAGGACTCAA 31343 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| || ||||| |||||||| || | || || | ||| || ||||| Sbjct 31342 CTTCAAGGGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 31294 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | || || ||||||||| || Sbjct 31295 ATACCACCTCTTAAACGAAGTACGAGATGGAGAGTTGATTCCTTTTGAATATTATAGTCC 31236 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || |||||||||||||| || || || || | ||||| || || Sbjct 31235 GATAAAGTACGGCCATCTTCCAATTGTTTACCGGCGAAGATCAAGCGTTGTTGATCTGGG 31176 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || ||| || | | ||| ||||| || || || Sbjct 31175 GGGATACCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCTATGGTATCAGAGGACTCG 31116 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| |||||||| || | || || | ||| || ||||| Sbjct 31115 ACTTCAAGAGTAATTGTTTTACCGGTGAGAGTCTTGACGAAAATTTGCAT 31066 Score = 89.7 bits (98), Expect = 9e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||||||| || | ||| | ||| | ||| | |||||| ||| || ||||| Sbjct 30383 ATACCACCTCTAAGACGGAGTACGAGATGAAGAGTTGACTCTTTCTGAATGTTGTAATCA 30324 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| ||| |||| ||||| ||||| || ||||| ||||| | ||||| || || Sbjct 30323 GATAAGCTACGTCCGTCTTCCAACTGTTTTCCGGCAAAGATTAAGCGTTGTTGATCCGGA 30264 Query 171960 GGTATTCCT 171968 || |||||| Sbjct 30263 GGAATTCCT 30255 >seq865 Length=39574 Score = 134 bits (148), Expect = 2e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || | ||| | ||| | ||| || ||||| |||||| Sbjct 10192 ATACCACCTCTTAAACGGAGCACGAGATGGAGAGTTGACTCCTTTTGGATATTGTAATCT 10133 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| | || |||||||||||||| ||||| || || | || || || || Sbjct 10132 GACAAGGTACGTCCATCTTCCAATTGTTTACCGGCAAAGATCAAGCGTTGCTGATCCGGG 10073 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || |||||||| ||||| || || ||| || || || || |||||||| || || Sbjct 10072 GGAATGCCTTCTTTGTCTTGAATCTTCGCTTTAAC-TTGGTCAATGGTATCTGAGGACTC 10014 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| |||||||| |||||||| || | || |||| ||| || ||||| Sbjct 10013 TACTTCAAGAGTAATAGTTTTACCGGTAAGAGTCTTAACGAAAATTTGCAT 9963 Score = 100 bits (110), Expect = 5e-16 Identities = 112/148 (76%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||| ||||||||||| ||||| ||||| || || || || |||||||| ||||| || Sbjct 10336 TGTTTGCCAGCAAAAATCAATCTTTGTTGATCTGGAGGGATACCTTCTTTGTCTTGAATC 10277 Query 171984 TTATTTTTTACATTAGTT--ATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTAC 172041 || | || || | ||| || ||||| || ||||| ||||| |||||||| ||||| | Sbjct 10276 TTTGTCTTGAC--TTGTTCAATTGTATCAGAAGATTCAACTTCAAGAGTAATAGTTTTCC 10219 Query 172042 CAGTTAATGTTTTAATGAATATCTGCAT 172069 | || | || || | || |||||||| Sbjct 10218 CGGTGAGGGTCTTTACAAAAATCTGCAT 10191 >seq2141 Length=12878 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | |||||| | ||||| ||| | ||| | |||||| ||| ||||||||| Sbjct 5133 ATACCTCCGCGAAGTCGAAGTACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCT 5074 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| ||||| ||||| | | || ||||| || Sbjct 5073 GAAAGGGTACGACCGTCTTCAAGTTGTTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGG 5014 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || ||||||||||| ||||| ||||| | |||| || || ||||| || || ||||| Sbjct 5013 GGAATTCCTTCTTTGTCTTGAATTTT-TGCTTTAACTTGGTCAATAGTGTCGGAAGATTC 4955 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || || || || || | ||||||| ||| || ||||| Sbjct 4954 AACTTCAAGGGTGATTGTCTTTCCGGTAAGGGTTTTAACGAAGATTTGCAT 4904 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || ||||| | || | |||||| |||||| || || Sbjct 5589 ATACCACCACGAAGACGAAGCACCAAATGAAGTGTTGACTCTTTTTGAATATTGTAGTCA 5530 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | ||||||||| || ||||| | | || || || || Sbjct 5529 GAAAGGGTTCGTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGG 5470 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| || || |||||| | | || ||||| || || || Sbjct 5469 GGAATACCTTCTTTGTCTTGAATCTTTGCTTTTACTTGATCGATGGTATCGGAAGACTCA 5410 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||||||| ||||||| ||||||| || || ||||| Sbjct 5409 ACTTCCAAAGTAATGGTTTTTCCAGTTAGAGTTTTAACAAAAATTTGCAT 5360 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| || | || || | || |||||||| |||||||| ||||| || | Sbjct 5769 ATGTTATAATCCGAAAGAGTACGACCATCTTCCAATTGCTTACCAGCGAAAATCAAACGT 5710 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || || || || || ||||||||||| ||||| |||| || | | || ||| Sbjct 5709 TGCTGATCTGGAGGGATACCCTCTTTATCTTGAATTTTGGTTTTAACCTGATCAATGGTA 5650 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||||| || || || ||||| || |||||||| | |||||| | || || ||| Sbjct 5649 TCAGATGATTCGACCTCAAGGGTAATCGTCTTACCAGTAAGTGTTTTTACAAAAATTTGC 5590 Query 172068 AT 172069 || Sbjct 5589 AT 5588 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | ||| || | || | ||| | ||| | ||||| |||||| || || Sbjct 5361 ATACCGCCACGAAGACGGAGAACGAGATGAAGAGTGGATTCTTTTTGAATATTGTAGTCG 5302 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | |||||||||||| ||||| | | || ||||| || Sbjct 5301 GAAAGGGTTCGTCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGTTGCTGGTCTGGG 5242 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || || || |||||||| ||||| ||||||| || || || ||||| || || || Sbjct 5241 GGGATACCCTCCTTATCTTGAATTTTGGTTTTTAC-TTGGTCGATGGTATCCGAGGACTC 5183 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| || | || |||||||| || || | ||| || | ||| || ||||| Sbjct 5182 TACGTCCAAGGTGATGGTTTTGCCGGTGAGTGTCTTTACGAAGATTTGCAT 5132 >seq6 Length=229349 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| || | || |||||||||||||| || | ||| | | ||||| ||||| | Sbjct 13959 CCACCCCTTAATCTTAATACTAAATGTAGCGTGGACTCAACACATATATTGTAATCACTT 14018 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| || | || || | ||| |||||||||||||||||||| ||||| || |||||| Sbjct 14019 AAAGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGT 14078 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || |||||||| || ||||| |||||| | | || ||||| | || ||| Sbjct 14079 ATACCTTCTTTTTCAGTAATTTTTGTTTTTAATTGATCAATTGTATCACTAAACTCGACT 14138 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 172056 || | || | ||||| |||||||||||||||| Sbjct 14139 TCAATTGTTAGAGTTTTTCCAGTTAATGTTTTAA 14172 >seq398 Length=62543 Score = 122 bits (134), Expect = 2e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | |||| ||||| | ||||| || | | ||| || || ||||| || Sbjct 57206 ACCACCAATTAGTCTCAATACCAGATGTATTGTGGAATGTTTTTTTATCTTGTAATCCGA 57147 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | || | || || | | |||||||||||| |||||| ||||| || || || Sbjct 57146 TAACGTACGGCCATCTTCAAGTAACATACCAGCAAAAACTAATCTTTGTTGATCTGGAGG 57087 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||| ||||||||||| || ||||| | ||||| ||| || ||||| | | || Sbjct 57086 TATCCCTTCTTTATCCTGAATTTTTTCTTTTAGGTTATAAATTGTATCACTAAAATTTAA 57027 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| || || |||||||||||||| ||||||| |||||| || Sbjct 57026 TTCTAGTGTTATAGTTTTACCAGTTAACGTTTTAACGAATATTTG 56982 Score = 86.0 bits (94), Expect = 1e-11 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | | || |||| | || ||| || | ||||| || || ||||| || Sbjct 52393 ACCACCACGTAATCTCAATATAAGATTTAATGTGGATTCTTTTTTTATCTTGTAATCCGA 52334 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | | || || || | | | |||||| |||||||| | ||||| | | || Sbjct 52333 TAACGTACAATCATCTTCAAGTAACATTCCAGCATAAATTAATTTTTGTTGACCTAGAGG 52274 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||| ||||||||||| || ||||| | |||||| | | || ||||| | || || Sbjct 52273 TATCCCTTCTTTATCCTGAATTTTTTCTTTTACGTAATAAATTGTATCACTAAAATCAAC 52214 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || ||||| |||||||||||||||||| || |||||| || Sbjct 52213 GCATATTGTAATACTTTTACCAGTTAATGTTTGAACGAATATTTG 52169 >seq446 Length=157017 Score = 100 bits (110), Expect = 5e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| | ||| | ||| || |||| ||||| ||||||| ||||| Sbjct 26277 ATCCCACCACGTAGTCTAAGTACAAGATGCAACGTAGACTCTTCTTGAATATTACAATCT 26218 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| | | | || |||||||| |||||||||||||| | | || |||||||| Sbjct 26217 GATAAAGTTTTTCCATCCTCCAATTGCTTACCAGCAAAAATAATACGTTGCTGGTCAGGA 26158 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| | | | ||| ||| | || ||||| || || || Sbjct 26157 GGAATGCCTTCTTTTTTCTCGACCTTAGATTTAATCATATCAATAGTGTCGCTTGAATCA 26098 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTAT 172074 | ||||| ||| ||||| || || |||||||| | || || | | |||||| Sbjct 26097 AAATCTAGGATAACTGTTTTTCCGGTCAATGTTTTCACAAAAATTTCCCTTTTAT 26043 >seq1933 Length=16258 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || | ||| | ||| | | | ||||||||||| | Sbjct 4016 ATACCACCTCTTAGACGGAGCACGAGATGAAGAGTTGATTTATCCCTAATATTATAATGT 3957 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| ||| || |||| ||||||||||||||| || || | || || | || Sbjct 3956 GTCAAAGTATGTTTATCTTCCAGTTGTTTACCAGCAAAGATCAAACGTTGCTGATTTGGA 3897 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || | |||||||||||||| ||| | ||||| || | | | ||||| || | || Sbjct 3896 GGAGTGCCTTCTTTATCTTGAATTATGTTTTTCACTTCTTTAACTGTATCGGAGGCATCA 3837 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | | ||| ||||| ||| ||| ||||||| || || || || Sbjct 3836 ACTTCAATGGCAATTGTTTTGCCACTTACAGTTTTAACAAAAATTTGTAT 3787 >seq1187 Length=25818 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || |||||||||||||| ||||| || | |||||||||||| Sbjct 11952 ACCACCTCTTAATCTTAATACTAAATGTACAGTAGATTCATGTTGTATATTATAATCTTC 12011 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || || || || | ||||||||| || | || || | ||||| || || || Sbjct 12012 TAAAGTGCGATCATCTTCAAGTTGTTTACCGGCCATAAGCAAACGTTGTTGATCTGGAGG 12071 Query 171962 TATTCCTTCT 171971 ||| |||||| Sbjct 12072 TATACCTTCT 12081 >seq1345 Length=28361 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| || | || | || || |||||||| ||||||||||| | | Sbjct 3619 ATATTATAATCACTCAAGGTACGCCCATCTTCTAATTGTTTTCCAGCAAAAATAAGACGT 3560 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT-ATAGT 172006 |||| ||||| | |||||||| |||||||| || | |||| || ||| || || Sbjct 3559 TGTTTATCAGGAGCAATTCCTTCCTTATCTTGAATCCT-GACTTTAATTTGGTTAATGGT 3501 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| ||||| ||||| || | || | ||||| || ||| |||||| | |||| ||| Sbjct 3500 ATCAGACGACTCTACCTCCAAGGTTACCGTTTTTCCGATTAGTGTTTTTACAAATACCTG 3441 Query 172067 CAT 172069 ||| Sbjct 3440 CAT 3438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905014542063000