Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593205.1_202016-03- 16] 14,476 sequences; 131,334,864 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1318 183 7e-41 seq3144 178 3e-39 seq352 158 3e-33 seq2123 150 4e-31 seq9491 131 4e-25 seq348 131 4e-25 seq153 118 2e-21 seq1364 114 3e-20 seq642 114 3e-20 seq1345 100 7e-16 seq147 91.5 3e-13 >seq1318 Length=24839 Score = 183 bits (202), Expect = 7e-41 Identities = 170/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||| | |||||||| |||||||| |||||||| || || || || | | || || Sbjct 4064 AAGTACCAAGTGTAATGTTGATTCTTTTTGAATATTGTAATCGGAAAGTGAACGTCCATC 4005 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||||| ||||| |||||||| |||| | |||||||| || || |||||||||||||| Sbjct 4004 TTCTAACTGTTTACCAGCAAATATTAAACGTTGTTGATCCGGGGGGATTCCTTCTTTATC 3945 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||| ||| |||| || || || | |||||||||| ||| || |||| ||||| || Sbjct 3944 TTGAATTTTTTCTTTGACTTTATCGATGGTATCGCTACTTTCAACTTCTAAAGTAATGGT 3885 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||||||||||||||| ||||| || ||||| || Sbjct 3884 TTTACCAGTAAGTGTTTTAACAAAAATTTGCATGTT 3849 >seq3144 Length=5517 Score = 178 bits (196), Expect = 3e-39 Identities = 337/492 (68%), Gaps = 8/492 (2%) Strand=Plus/Plus Query 269076 GaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCGCCTTAC---GGAGAAA 269132 |||||||| | || |||||||| |||||| ||||| | ||| | ||| Sbjct 4515 GAAAAAAAGCGGATTGGGCTCTTCGATGGATTTCCGATAAGGAATCTTCATTTGCTGAAC 4574 Query 269133 GGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCT 269192 | | || || ||||||||||| ||||| ||||||||||| || |||| || | |||| Sbjct 4575 GTCTTGTAGCGTTTGCCGCTGTTGAAGGAATATTCTTTTCTGGAGCTTTCGCGTCAATCT 4634 Query 269193 TTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCA 269252 ||||||| ||||||||||| | ||||||||||||||||| || |||||| | || Sbjct 4635 TTTGGTTAAAGAAAAGAGGAATGATGCCAGGATTAACTTTTTCCAACGAACTAATTTCTC 4694 Query 269253 GGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACA 269312 | || ||||| || || || || || || ||| | ||||| ||| || || | ||| Sbjct 4695 GAGATGAAGGATTGCATTGTGATTTTGCATGTCTCTTATTCACTCATCTTCGTGCAC--- 4751 Query 269313 AACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAAT 269372 |||| | | | | ||| | | ||||||| ||| ||| | ||||| ||||| Sbjct 4752 GACCTCCAACAAAAACTGTAGAAGCTATTATAGCGGAAGCGGTTACAATAGAACAAGAAT 4811 Query 269373 TTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAAT 269432 || |||| ||||| || | | || | || |||||||| || | |||| | ||| Sbjct 4812 TTTTAACAGAAGCATTACCAGTTAATTTAATTGGTATGAACGCGAATTTAATGAAAAAAT 4871 Query 269433 ATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAA-AATATAAC 269491 ||||| | || ||| |||||||||| | ||| | | ||| || |||| ||||| Sbjct 4872 ATATTGAATTTGTAGCTGATAGATTATTAGTGGCACT-TGGTGGAGCAAAATTGTATAAT 4930 Query 269492 GTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTC 269551 || ||||| ||| ||||||||| || ||| ||||||| | |||||||| Sbjct 4931 TCAGAGAATCCTTTTGATTTTATGGATTTAATTAGTTTACAAGGTAAAACAAATTTCTTT 4990 Query 269552 GAGAAGCGGGTA 269563 || || || ||| Sbjct 4991 GAAAAACGCGTA 5002 Score = 145 bits (160), Expect = 2e-29 Identities = 204/281 (73%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801 ||||||||| |||||| ||||| ||||||||||| || ||||| || || || | || Sbjct 4099 ATGTACAAAAAGGCCGAAGCTTCATTTTGGACTGTTGAGGAAGTTGACCTTTCCAAGGAT 4158 Query 268802 TTAATAGATTGGAA----AAATTTAAAACCA-GAAGAAAGAAGATTTATATCTTATATTC 268856 | | |||||| | ||| |||| | | ||||||| | ||||| ||| | || Sbjct 4159 ATGAATGATTGGGAGTATAAACTTAA--CGATGAAGAAAAATTCTTTATTTCTCACGTTT 4216 Query 268857 TTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT-GT 268915 | || || ||||| | |||||||| || || |||||| |||| || | ||| | || Sbjct 4217 TGGCCTTCTTTGCCGCCTCGGATGGTATTGTCAATGAAAATTTAGTGGA-ACGTTTTAGT 4275 Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975 | || || || ||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct 4276 AATGAAGTCCAAATTCCAGAAGCAAGATGTTTTTATGGATTTCAGATCATGATCGAAAAT 4335 Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016 || |||||||| |||||| || || || ||| ||||||| Sbjct 4336 ATCCATTCAGAAATGTACTCCCTCTTGATTGATTCTTATAT 4376 >seq352 Length=65406 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||||| ||||| | || |||||||| ||||||||||| || Sbjct 29639 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 29698 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||| | || ||||| | |||||| ||||| || |||| | |||||||| ||| Sbjct 29699 GACAAAGTACGCCCATCTTCCAATTGTTTACCAGCGAAGATTAAGCGTTGTTGATCTGGA 29758 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| ||||| |||||||||||||| || | || | ||||| | | || Sbjct 29759 GGAATTCCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCAATAGTATCATTGGACTCG 29818 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || || |||||||| || || || ||||| ||||| Sbjct 29819 ACTTCAAGGGTAATGGTTTTCCCAGTAAGGGTCTTGACGAATATTTGCAT 29868 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||||| ||||| | || |||||||| ||||| |||||||| Sbjct 29411 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTGGATTCTTTTTGAATGTTATAGTCT 29470 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | ||| ||||||| |||||| ||||| || || | | |||||||| || Sbjct 29471 GACAATGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGG 29530 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| |||||||||||||| || | |||| |||||| | ||| Sbjct 29531 GGGATACCTTCTTTATCTTGAATCTTTGCTTTAACTTGGTCTATGGTATCAGAGGACTCT 29590 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| || || ||||| || || || ||||| Sbjct 29591 ACTTCAAGAGTGATTGTTTTACCGGTCAGCGTTTTAACGAAAATTTGCAT 29640 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||| ||||| | ||||||||||| ||||||||||| || |||| ||| | ||| || Sbjct 28744 AAGTACGAGATGGAGAGTAGATTCTTTTTGAATATTATAATCCGATAAAGTACGACCATC 28803 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| | |||||| ||||| || || | | || ||||| ||||| || ||||| ||||| Sbjct 28804 TTCCAATTGTTTACCAGCGAAGATCAAGCGTTGCTGATCTGGAGGAATACCTTCCTTATC 28863 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||||||||| || | |||| |||||| | || || || || ||||| || Sbjct 28864 TTGAATCTTTGCTTTAACTTGGTCTATGGTATCAGAGGACTCAACTTCAAGGGTAATTGT 28923 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || || || || ||||| Sbjct 28924 TTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 28956 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||||| ||||| | || |||||||| ||||||||||| || Sbjct 29183 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 29242 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | ||| ||||||| |||||| ||||| || || | | |||||||| ||| Sbjct 29243 GACAACGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGA 29302 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| |||||||| | |||||| | |||| |||||| | || Sbjct 29303 GGGATACCTTCTTTATCTTGAATCTTCGTTTTTACTTGATCTATGGTATCAGAGGACTCG 29362 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| || || || || || || || ||||| Sbjct 29363 ACTTCAAGAGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 29412 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | |||||| ||||| | || ||||| || |||||||||||||| Sbjct 28955 ATACCACCTCTTAAACGAAGTACGAGATGGAGAGTTGATTCCTTTTGAATATTATAGTCC 29014 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||| | || ||||| | |||||| || || || || | | |||||||| || Sbjct 29015 GATAAAGTACGGCCATCTTCCAATTGTTTACCGGCGAAGATCAAGCGTTGTTGATCTGGG 29074 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||| |||||||||||||| || | |||| |||||| | || Sbjct 29075 GGGATACCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCTATGGTATCAGAGGACTCG 29134 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| || || || || || || || ||||| Sbjct 29135 ACTTCAAGAGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 29184 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| || || ||||| || | ||||| ||||| | || || ||||||||||| || Sbjct 29860 TATTTGCATACCACCTCTAAGACGGAGTACGAGATGAAGAGTTGACTCTTTCTGAATGTT 29919 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 || ||||||| | | |||||||| | |||||||| ||||| |||| | ||||| Sbjct 29920 GTAATCAGATAAGCTACGTCCGTCTTCCAACTGTTTTCCGGCAAAGATTAAGCGTTGTTG 29979 Query 104443 ATCAGGAGGTATTCCT 104458 ||| ||||| |||||| Sbjct 29980 ATCCGGAGGAATTCCT 29995 >seq2123 Length=30488 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | ||| || ||||| |||||||| |||||||| || |||| || || Sbjct 14809 AAGCACCAAATGAAGTGTTGACTCTTTTTGAATATTGTAGTCAGAAAGGGTTCGTCCATC 14868 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || |||||||| || || ||||| || | || ||||| || || || |||||||| || Sbjct 14869 CTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTC 14928 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||||||||||| | || | ||||||| || || || || | ||||| || Sbjct 14929 TTGAATCTTTGCTTTTACTTGATCGATGGTATCGGAAGACTCAACTTCCAAAGTAATGGT 14988 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| ||||| || ||||| Sbjct 14989 TTTTCCAGTTAGAGTTTTAACAAAAATTTGCAT 15021 Score = 150 bits (166), Expect = 4e-31 Identities = 174/233 (75%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||||||||| | || || ||||| ||||| ||||| || || || || | |||||| Sbjct 15265 AAGTACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGAAAGGGTACGACCGTC 15324 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| |||||||| ||||| ||||| || | || || || || || ||||||||||| || Sbjct 15325 TTCAAGTTGTTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGGGGAATTCCTTCTTTGTC 15384 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||| |||||||| || | || | || ||| || ||| || || || || || || Sbjct 15385 TTGAATTTTTGCTTTAACTTGGTCAATAGTGTCGGAAGATTCAACTTCAAGGGTGATTGT 15444 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACAGTATTTATTA 104579 ||| || ||||| ||||| || || || ||||| | ||| | |||| |||| Sbjct 15445 CTTTCCGGTAAGGGTTTTAACGAAGATTTGCATGAT-TGTTAATTATTAATTA 15496 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| || || ||||| || || ||||| | ||| ||||| | ||| || ||| Sbjct 14597 GTTGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGACCATCTTCCAATTGCTTACCA 14656 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | || ||||| ||||| || || |||||||| ||||| || | ||| Sbjct 14657 GCGAAAATCAAACGTTGCTGATCTGGAGGGATCCCCTCTTTATCTTGAATTTTGGTTTTA 14716 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || | || | |||||| | ||| ||||| || ||||| |||||||||||||||||| Sbjct 14717 ACCTGATCAATGGTATCAGATGATTCGACCTCAAGGGTAATCGTCTTACCAGTAAGTGTT 14776 Query 104543 TTTACAAATATCTGCAT 104559 |||||||| || ||||| Sbjct 14777 TTTACAAAAATTTGCAT 14793 >seq9491 Length=922 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || | ||| ||||||| ||| || | ||| | || || || || |||| || | Sbjct 531 AGTCTCAATACCAGATGTATTGTGGAATGTTTTTTTATCTTGTAATCCGATAACGTACGG 472 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||| | |||||||||| || || |||||||| |||||||| |||||| Sbjct 471 CCATCTTCAAGTAACATACCAGCAAAAACTAATCTTTGTTGATCTGGAGGTATCCCTTCT 412 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 ||||||||||| ||| |||||| || | | ||||| ||| | || |||||||| Sbjct 411 TTATCCTGAATTTTTTCTTTTAGGTTATAAATTGTATCACTAAAATTTAATTCTAGTGTT 352 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTG 104556 ||||| |||||||| | ||| || || ||||| || Sbjct 351 ATAGTTTTACCAGTTAATGTATTAACGAATATTTG 317 >seq348 Length=51996 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | ||| |||||||| ||||| | ||| | ||||| || |||| ||| || Sbjct 39575 ATTCCTCCACGTAGTCTAAGTACAAGATGAATTGTGCACTCTTTTTGGATATAATAATCT 39634 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | || ||||||| ||| | ||||||||||| || | |||||||||||| Sbjct 39635 GACAAGGTACGTCCTTCTTCTAATTGCGTGCCAGCAAAAATAAGGCGTTGTTGATCAGGA 39694 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || | |||||| ||| | || || | ||||| || | | Sbjct 39695 GGAATTCCTTCTTTGTCATAAATCTTACATTTAAGTTTGTCAATTGTATCACTCGAAGCC 39754 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTG 104556 ||| | ||| | || || ||||| |||||||| ||||||| ||| Sbjct 39755 GTCTCCAATGTTAATGTTTTTCCAGTTAGTGTTTTCACAAATACCTG 39801 >seq153 Length=99528 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 |||| |||||| |||||||| | || || || || |||| || | | | ||||| ||| Sbjct 92031 AGATTTAATGTGGATTCTTTTTTTATCTTGTAATCCGATAACGTACAATCATCTTCAAGT 92090 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 |||||||| |||||| | |||||| | ||||||| ||||||||||||||||| Sbjct 92091 AACATTCCAGCATAAATTAATTTTTGTTGACCTAGAGGTATCCCTTCTTTATCCTGAATT 92150 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 ||| ||||||| | | | ||||| ||| || || || ||||||| | |||||| Sbjct 92151 TTTTCTTTTACGTAATAAATTGTATCACTAAAATCAACGCATATTGTAATACTTTTACCA 92210 Query 104534 GTAAGTGTTTTTACAAATATCTG 104556 || | ||||| || ||||| || Sbjct 92211 GTTAATGTTTGAACGAATATTTG 92233 >seq1364 Length=43964 Score = 114 bits (126), Expect = 3e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 ||||| ||||||||||| | || |||||||| ||||| || |||||||| || |||||| Sbjct 16072 TGTTTGCCAGCAAAAATCAATCTTTGTTGATCTGGAGGGATACCTTCTTTGTCTTGAATC 16013 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 |||| || || | ||| | ||||| || ||| || || || |||||||| || || Sbjct 16012 TTTGTCTTGACTTGTTCAATTGTATCAGAAGATTCAACTTCAAGAGTAATAGTTTTCCCG 15953 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || || || |||||||| |||||||| Sbjct 15952 GTGAGGGTCTTTACAAAAATCTGCAT 15927 >seq642 Length=35260 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| |||||||| ||||| || ||||| |||| ||||||||||| || Sbjct 6667 ATCCCACCACGTAGTCTAAGTACAAGATGCAACGTAGACTCTTCTTGAATATTATAATCT 6608 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| |||| | || || || | ||| || ||||||||||| | | || || |||||| Sbjct 6607 GATAAAGTTTTTCCATCCTCCAATTGCTTACCAGCAAAAATAATACGTTGCTGGTCAGGA 6548 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| | || | ||| | ||| | | || | || ||||| | || Sbjct 6547 GGAATGCCTTCTTTTTTCTCGACCTTAGATTTAATCATATCAATAGTGTCGCTTGAATCA 6488 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | ||||| ||| || || || || | |||||| ||||| Sbjct 6487 AAATCTAGGATAACTGTTTTTCCGGTCAATGTTTTCACAAA 6447 >seq1345 Length=25233 Score = 100 bits (110), Expect = 7e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 104378 ATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTC 104437 ||||| || ||| || ||| | || ||||| ||||| || ||||||||||||| || Sbjct 19599 ATATTGTAATCACTTAAAGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATTAATCTT 19540 Query 104438 TGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTA 104497 |||||||| || ||||| |||||||| || ||| |||| ||||| | || | ||| Sbjct 19539 TGTTGATCTGGTGGTATACCTTCTTTTTCAGTAATTTTTGTTTTTAATTGATCAATTGTA 19480 Query 104498 TCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || ||| || || || | ||| | ||| || ||||| | |||||| || Sbjct 19479 TCACTAAACTCGACTTCAATTGTTAGAGTTTTTCCAGTTAATGTTTTAAC 19430 >seq147 Length=125324 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||||||| |||||||| ||| | || | | ||||||| ||| ||||||||||| Sbjct 74558 TCTTTCTGGATATTATAATCACTCAAGGTACGCTCATCTTCTAATTGACTTCCAGCAAAA 74617 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | || |||||| || |||||||| || || || ||| |||| |||| | Sbjct 74618 ATAAAACGTTGACTATCAGGGGGAATTCCTTCCTTGTCTTGGATC-TTGCATTTAACTAG 74676 Query 104489 TCT-ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | |||||| | |||||||| | || | || || || || ||||||||||| Sbjct 74677 GCTGATGGTATCAGACGACTCTACCTCCAAGGTTACCGTTTTTCCGGTTAGTGTTTTTAC 74736 Query 104548 AAATATCTGCAT 104559 ||||| |||||| Sbjct 74737 AAATACCTGCAT 74748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151184845821008