Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593205.1_202016-03- 16] 14,476 sequences; 131,334,864 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2123 134 1e-26 seq352 120 3e-22 seq1345 96.9 3e-15 seq1318 91.5 1e-13 seq9491 84.2 2e-11 seq1364 84.2 2e-11 seq348 82.4 7e-11 >seq2123 Length=30488 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| ||||||||||| | || || | ||| | || || | Sbjct 15021 ATGCAAATTTTTGTTAAAACTCTAACTGGAAAAACCATTACTTTGGAAGTTGAGTCTTCC 14962 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || |||||||| ||||| ||| ||||||| ||||||||||| || || || ||||| Sbjct 14961 GATACCATCGATCAAGTAAAAGCAAAGATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 14902 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| || ||| |||||||| || |||| ||| | | ||||| || Sbjct 14901 CAACGTCTCATTTTCGCCGGTAAACAACTTGAGGATGGACGAACCCTTTCTGACTACAAT 14842 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||||||| || || | ||| |||| || Sbjct 14841 ATTCAAAAAGAGTCAACACTTCATTTGGTGCT 14810 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| | || ||||| | |||||| | ||| | ||||| | Sbjct 15477 ATGCAAATCTTCGTTAAAACCCTTACCGGAAAGACAATCACCCTTGAAGTTGAATCTTCC 15418 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || ||||| ||| ||| ||| ||||||||||| || || || || || Sbjct 15417 GACACTATTGACCAAGTTAAAGCAAAAATTCAAGACAAAGAAGGAATTCCCCCAGACCAG 15358 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| || ||||||||||| ||||| | | | | | | || |||||| Sbjct 15357 CAACGTCTTATTTTCGCTGGCAAACAACTTGAAGACGGTCGTACCCTTTCAGATTATAAC 15298 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || ||| | ||||| || || ||||| | ||||| Sbjct 15297 ATTCAAAAAGAGTCAACTCTTCATCTAGTACTTCGACTTCGCGGAGG 15251 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||||||| | ||||| || |||| ||| | || | |||||| Sbjct 14793 ATGCAAATTTTTGTAAAAACACTTACTGGTAAGACGATTACCCTTGAGGTCGAATCATCT 14734 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || || || ||| || ||| || ||||| ||||| ||||| ||||| Sbjct 14733 GATACCATTGATCAGGTTAAAACCAAAATTCAAGATAAAGAGGGGATCCCTCCAGATCAG 14674 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| || || || ||| | ||||||| | | | | || |||||| Sbjct 14673 CAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGATGGTCGTACTCTTTCGGATTATAAC 14614 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| ||| | || || ||||| Sbjct 14613 ATCCAAAAAGAATCAACTCTTCACCTCGTCCT 14582 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || ||||| ||| | || || ||| | |||||| | || |||| || Sbjct 15249 ATGCAAATCTTCGTAAAGACACTCACCGGCAAAACCATCACCTTGGACGTAGAGTCCTCG 15190 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || |||||||| ||||| ||| || ||| || || || || || || || || || Sbjct 15189 GATACCATCGACCAAGTAAAAACCAAAATTCAAGATAAGGAGGGTATCCCCCCAGACCAG 15130 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| || || |||||||| || |||| ||| | | |||||| || Sbjct 15129 CAACGTCTCATTTTCGCTGGTAAACAACTTGAGGATGGACGAACCCTTTCCGACTACAAT 15070 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||||||| ||| | ||||| || || Sbjct 15069 ATTCAAAAAGAATCCACTCTTCATCTCGTTCT 15038 >seq352 Length=65406 Score = 120 bits (132), Expect = 3e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| | || || ||| | ||||| | ||| |||| || Sbjct 29640 ATGCAAATTTTCGTTAAAACGCTGACCGGTAAAACAATCACTCTTGAAGTAGAGTCCTCT 29581 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || ||||| ||| ||||||| || |||||||| || || || |||||| Sbjct 29580 GATACCATAGACCAAGTTAAAGCAAAGATTCAAGATAAAGAAGGTATCCCCCCAGATCAA 29521 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 ||| | | || | || || |||||| | ||||||| | | | ||||| |||||| Sbjct 29520 CAACGCTTGATCTTCGCTGGTAAACAATTAGAAGATGGTCGTACATTGTCAG--ACTATA 29463 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||||||||| ||| ||||||| || || Sbjct 29462 ACATTCAAAAAGAATCCACTCTCCATCTCGTACT 29429 Score = 105 bits (116), Expect = 6e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | ||||| ||| | || ||| | ||| | || || || Sbjct 29868 ATGCAAATATTCGTCAAGACCCTTACTGGGAAAACCATTACCCTTGAAGTCGAGTCCAAT 29809 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || ||||| ||| ||||||| || || ||||| || ||||| |||||| Sbjct 29808 GATACTATTGATCAAGTTAAAGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAA 29749 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 ||| | | || | || || |||||| | ||||||| | | ||||| | |||| Sbjct 29748 CAACGCTTAATCTTCGCTGGTAAACAATTGGAAGATGGGCGTACTTTGTCAG--ATTATA 29691 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | |||||||||||||| ||| ||||||| || || Sbjct 29690 ATATTCAAAAAGAATCAACTCTCCATCTCGTACT 29657 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || ||| | || ||| | ||| | || || Sbjct 28956 ATGCAAATTTTCGTCAAGACCCTCACCGGTAAAACAATTACCCTTGAAGTTGAGTCCTCT 28897 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || ||||| ||| ||||||| || || ||||| || ||||| ||||| Sbjct 28896 GATACCATAGACCAAGTTAAAGCAAAGATTCAAGATAAGGAAGGTATTCCTCCAGATCAG 28837 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATAA 26947 ||| | | || | || || |||||| | ||||||| | | | | | | || | ||||| Sbjct 28836 CAACGCTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGTA-CTTTATCGGATTATAA 28778 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||||||||||| ||||||| || || Sbjct 28777 TATTCAAAAAGAATCTACTCTCCATCTCGTACT 28745 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || ||| | || || | ||| | || || Sbjct 29412 ATGCAAATTTTCGTCAAGACCCTCACCGGTAAAACAATTACTCTTGAAGTCGAGTCCTCT 29353 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || ||||| ||| |||||| || |||||||| || ||||| |||||| Sbjct 29352 GATACCATAGATCAAGTAAAAACGAAGATTCAAGATAAAGAAGGTATCCCTCCAGATCAA 29293 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| | | || | || || |||||| | ||||||| | | | ||| | || ||||| Sbjct 29292 CAACGCTTGATCTTCGCTGGTAAACAATTAGAAGATGGTCGTA-CGTTGTCAGATTATAA 29234 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||||||| ||| ||||||| || || Sbjct 29233 TATTCAAAAAGAATCAACTCTCCATCTCGTACT 29201 >seq1345 Length=25233 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 26775 GTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACC 26834 |||| || |||||||||||||||||| | | || || ||| | || | | || || Sbjct 19424 GTGTACGTTAAAACATTAACTGGAAAAACTCTAACAATTGAAGTCGAGTTTAGTGATACA 19483 Query 26835 ATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGA 26894 || || ||| | ||| ||| ||||| || |||||||| ||||| || |||||||||||| Sbjct 19484 ATTGATCAATTAAAAACAAAAATTACTGAAAAAGAAGGTATACCACCAGATCAACAAAGA 19543 Query 26895 CTCATTTACGGCGGCAAACAACTCGAAGATG 26925 | |||| | || || ||||| ||||||| Sbjct 19544 TTAATTTTTGCTGGTAAGCAACTTGAAGATG 19574 >seq1318 Length=24839 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || |||||| | ||||| |||||| | ||||| ||| | || || | ||| | ||| Sbjct 3849 AACATGCAAATTTTTGTTAAAACACTTACTGGTAAAACCATTACTTTAGAAGTTGAAAGT 3908 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | ||| |||||||| |||||||| |||| ||| || |||||||| || || || ||| Sbjct 3909 AGCGATACCATCGATAAAGTCAAAGAAAAAATTCAAGATAAAGAAGGAATCCCCCCGGAT 3968 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| | | || | | || ||||| | ||||||| | | ||| || Sbjct 3969 CAACAACGTTTAATATTTGCTGGTAAACAGTTAGAAGATGGACGTTCACTTTCCGATTAC 4028 Query 26946 AACATTCAAAAAGAATCTAC 26965 || |||||||||||||| || Sbjct 4029 AATATTCAAAAAGAATCAAC 4048 >seq9491 Length=922 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 26772 CAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGAC 26831 ||| | || || || ||||||||||| ||| | || || | |||||| | | | || Sbjct 317 CAAATATTCGTTAATACATTAACTGGTAAAACTATAACACTAGAATTAAATTTTAGTGAT 376 Query 26832 ACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAA 26891 || || | | | ||| |||| ||| || ||||||||||||||||| ||||||||| Sbjct 377 ACAATTTATAACCTAAAAGAAAAAATTCAGGATAAAGAAGGGATACCTCCAGATCAACAA 436 Query 26892 AGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAACAT 26950 ||| | ||| | || | ||| ||||||| | |||| | | || || || || Sbjct 437 AGATTAGTTTTTGCTGGTATGTTACTTGAAGATGGCCG-TACGTTATCGGATTACAAGAT 495 Query 26951 TCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTA 26988 ||||| | || || || |||||||| ||||||||| Sbjct 496 AAAAAAACATTCCACAATACATCTGGTATTGAGACTTA 533 >seq1364 Length=43964 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | |||||||| || | || || ||| | || || | ||| | ||||| Sbjct 15927 ATGCAGATTTTTGTAAAGACCCTCACCGGGAAAACTATTACTCTTGAAGTTGAATCTTCT 15986 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || |||||||| ||||||| ||||||||||| || ||||| |||||| Sbjct 15987 GATACAATTGAACAAGTCAAGACAAAGATTCAAGACAAAGAAGGTATCCCTCCAGATCAA 16046 Query 26889 CAAAGACTCATTTACGGCGGCAAACA 26914 |||||| | |||| | |||||||| Sbjct 16047 CAAAGATTGATTTTTGCTGGCAAACA 16072 >seq348 Length=51996 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/228 (68%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 26772 CAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGAC 26831 || || ||||| |||||| ||||||||||| | | || | || | || | || Sbjct 39801 CAGGTATTTGTGAAAACACTAACTGGAAAAACATTAACATTGGAGACGGCTTCGAGTGAT 39742 Query 26832 ACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAA 26891 || || || || | ||| |||||| ||||||||||| || ||||| ||||||||| Sbjct 39741 ACAATTGACAAACTTAAATGTAAGATTTATGACAAAGAAGGAATTCCTCCTGATCAACAA 39682 Query 26892 AGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATAACA 26949 | || |||| | |||| ||| | ||||| | | | | |||| || ||| | | Sbjct 39681 CGCCTTATTTTTGCTGGCACGCAATTAGAAGAAGGACGTACCTTGTCA--GATTATTATA 39624 Query 26950 TTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 | |||||||| | || || ||||| || || ||||| | ||||||| Sbjct 39623 TCCAAAAAGAGTGCACAATTCATCTTGTACTTAGACTACGTGGAGGAA 39576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478575786038720