Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1026 91.5 1e-13 >seq1026 Length=25707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 120/165 (73%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 22728 GTCTATCGCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTC 22787 |||| ||||| ||||||| | || || || || ||||| || || | || || || || Sbjct 12812 GTCT-TCGCAGAACGTCTCGTCGCTTTCGCCGCAGTTGAGGGTATCTTCTTCTCCGGCTC 12754 Query 22788 ATTTGCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAA 22847 ||||| |||| |||||||||||||| || | ||||| || | | || ||||| Sbjct 12753 CTTTGCTTCCATCTTCTGGCTGAAGAAGCGAGGCATGATGCCCGGCCTCACTTTCTCCAA 12694 Query 22848 CGAGTTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 ||| | || |||||||||||| || ||||| || |||||||| Sbjct 12693 CGAACTCATCTCCCGTGACGAAGGCCTCCACTGCGATTTTGCTTG 12649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356225290183342