Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq999 95.1 9e-15 >seq999 Length=50871 Score = 95.1 bits (104), Expect = 9e-15 Identities = 146/205 (71%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || ||||| |||||||| ||| ||| | | |||| || | |||| Sbjct 17956 TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGAGTGCGGTCGTCCTCGAGTTGT 18015 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| ||| | || | |||||| ||||| ||||| |||||||||| ||||| Sbjct 18016 TTGCCGGCGAAGATGAGACGTTGCTGGTCAGGGGGAATGCCTTCTTTGTTCTGGATTTTC 18075 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCT-AAGGTAATGGTTTTACCTGT 15339 |||| || |||| || || ||| ||| ||||| |||| || || || || || Sbjct 18076 GTCTTCACGTTTTCGATCGTGTCG--GAGGTCTCCATCTCAAGG--ATTGTCTTTCCCGT 18131 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || || ||||| ||| Sbjct 18132 GAGCGTTTTGACGAAGATTTGTATA 18156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362170751491074