Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1211 100 2e-16 >seq1211 Length=8054 Score = 100 bits (110), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 25389 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAG 25448 ||||| || || ||||||||| | | |||| |||| || || || ||||| || Sbjct 782 GGAAACGGCCTCGGCTCCCTCCCCAACTGAACTTTCAACGCCTCAACATGATCATTATAC 841 Query 25449 ACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCC 25508 || || ||||| |||| | ||||||||||||||||| || || || || | || Sbjct 842 ACATGCGCGTCACCCAAACAATGGACAAACTCTCCCGGACGGAGACCCGTGACATGGGCG 901 Query 25509 ATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCC 25568 |||||| || ||||| |||| ||||||||| ||||| || |||| ||||||| | Sbjct 902 ATCATGATGGTTAGGAGGGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGGCCCATGT-C 960 Query 25569 CCCCGACCTCTGGTAGAGCTGACACGAGAG 25598 | || | |||||||| || || ||||| Sbjct 961 GCAGGAGCGTTGGTAGAGTTGGCAGGAGAG 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340129665652722