Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1685 86.0 3e-12 >seq1685 Length=98515 Score = 86.0 bits (94), Expect = 3e-12 Identities = 67/80 (84%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 ||||||||||| |||||| ||||||||||||| ||||||| |||||||||||||| | Sbjct 59866 GGATCGAACCTGTGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAA--GC 59923 Query 11528 CCGTCGACGATTGTGATTTT 11547 | |||||| |||||||| Sbjct 59924 GAGCTGACGATGGTGATTTT 59943 Lambda K H 0.640 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261485100227464