Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq999 82.4 6e-11 >seq999 Length=50871 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/199 (70%), Gaps = 7/199 (4%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 || ||||| || |||||||||||||||||||| || || | | || | |||| || | Sbjct 18155 ATACAAATCTTCGTCAAAACGCTCACGGGAAAGACAAT---CCTTGAGATGGAGACCTCC 18099 Query 115346 GACACTGTTGGACAAGT-AAAACAAAAAATTGCCG-ATAAAGAAGGCGTCCCCGTTGATC 115403 ||||| | | | | || || || |||| | | | | ||||||||| | ||| ||| | Sbjct 18098 GACACGATCGAAAACGTGAAGACGAAAA--TCCAGAACAAAGAAGGCATTCCCCCTGACC 18041 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | || || | || ||||||||| | || || ||| || | |||| || | Sbjct 18040 AGCAACGTCTCATCTTCGCCGGCAAACAACTCGAGGACGACCGCACTCTCTCCGACTACA 17981 Query 115464 ACATTCAAAAAGAGTCTAC 115482 |||| ||||| || || || Sbjct 17980 ACATCCAAAAGGAATCCAC 17962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425334078053680