Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq736 93.3 5e-14 >seq736 Length=77482 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/206 (71%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 93423 ATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC-TCTACGAGA 93481 ||||||| || || | ||||| | |||| || || | || |||| | | | | | | Sbjct 56022 ATCCGTAAAAGCACCGTGCTTCTGCATTCTGAACCTCGTTCGAGAATCGCATATTCAA-A 56080 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 ||||||||||| || || || ||||| ||||| || ||||| | ||| ||||||| | | Sbjct 56081 TTTTCATTGACAATGCCGTCCGATGCGGCAAAGAACGCCAAGACATGACTTATAAAGTAT 56140 Query 93542 TTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 |||| || | || ||| || ||||| ||| || || || | ||||||||| ||| Sbjct 56141 CTCTCGTCCTGGTTGAGCTTGTTCTCCCAGTCGCCTATGTCCTTCGCAAGATCGACCTCT 56200 Query 93599 TCGACAGTCCAAAACGATGCTTCTGC 93624 || | ||||| ||||| || || || Sbjct 56201 TCAGCGGTCCAGAACGAAGCCTCAGC 56226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556847477105360