Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1040 95.1 1e-14 >seq1040 Length=98796 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 154875 ATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAG 154934 |||||||| |||||||||||| ||||||| ||||| ||| || || ||| Sbjct 10293 ATGATTACGTACCCATCTACATATGGTGTGTTTGAGGACGGGATTGTCGAGGCTTGCAAG 10234 Query 154935 ATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTA 154994 ||| | ||||| ||||| || ||||| ||| | |||||||| ||| | ||||||||| | Sbjct 10233 ATCATACATGAGAATGGGGGCCAGGTGTATATGGATGGAGCCAATTTGAATGCACAGATG 10174 Query 154995 GGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACA 155054 || | || || ||| ||| || ||||| |||||| | || |||||||| || Sbjct 10173 GGGTTGTGTAAGCCGGCCGAGATTGGGGCGGATGTGTGTCATTTGAATTTACATAAGACT 10114 Query 155055 TTCTG 155059 || || Sbjct 10113 TTTTG 10109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579198942333760