Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1211 120 2e-22 >seq1211 Length=8054 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 29826 ||||| || || ||||||||| | | |||| |||| || || || ||||| || Sbjct 782 GGAAACGGCCTCGGCTCCCTCCCCAACTGAACTTTCAACGCCTCAACATGATCATTATAC 841 Query 29827 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29886 || || ||||| |||| ||||||||||||||||| || || ||||| || || Sbjct 842 ACATGCGCGTCACCCAAACAATGGACAAACTCTCCCGGACGGAGACCCGTGACATGGGCG 901 Query 29887 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 29946 |||||| || ||||| | |||| ||||||||| ||||| || ||||| |||||||| Sbjct 902 ATCATGATGGTTAGGAGGGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGGCCCATGTCG 961 Query 29947 CCCGACCTCTGGTAGAGCTGACACGAGAG 29975 | || | |||||||| || || ||||| Sbjct 962 CAGGAGCGTTGGTAGAGTTGGCAGGAGAG 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408608068228322