Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1416 86.0 5e-12 >seq1416 Length=13108 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||| ||||| || || || | ||| | || ||||||||||| || ||||| Sbjct 8097 CTCCTTCTGAATGTTGTAGTCGGAGAGCGTACGACCATCCTCCAACTGCTTCCCCGCAAA 8156 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || || || ||||| | ||||| ||||||||||| ||||| ||| || Sbjct 8157 GATGAGACGTTGCTGATCAGGGGGAATACCCTCCTTGTCTTGGATCTTCGTTTTGACGTT 8216 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || | |||||| || | || ||||| || || || | || || || Sbjct 8217 CTCGATAGTGTCGGAGGACTCCACTTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCAC 8276 Query 48755 AAAAATCTGCAT 48766 ||| || ||||| Sbjct 8277 AAAGATTTGCAT 8288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380928713916222