Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1416 82.4 6e-11 >seq1416 Length=13108 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || | |||||||| || || || ||||| |||| | | Sbjct 8288 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACTCTCGAAGTGGAGTCCTCC 8229 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | || ||| |||||| ||||| || || | ||| ||||| Sbjct 8228 GACACTATCGAGAACGTCAAAACGAAGATCCAAGACAAGGAGGGTATTCCCCCTGATCAG 8169 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | |||||| || ||| ||||||||| | || | | || |||||| Sbjct 8168 CAACGTCTCATCTTTGCGGGGAAGCAGTTGGAGGATGGTCGTACGCTCTCCGACTACAAC 8109 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| || || || || | ||| | ||| Sbjct 8108 ATTCAGAAGGAGTCGACCCTCCACCTCGTG 8079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412831969695602