Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1416 89.7 1e-12 >seq1416 Length=13108 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||||||| | |||||||| || ||||| |||| Sbjct 8273 AAGACCCTCACCGGCAAGACGATCACTCTCGAAGTGGAGTCCTCCGACACTATCGAGAAC 8214 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||| ||||| || || || ||| || || ||| | || ||||| Sbjct 8213 GTCAAAACGAAGATCCAAGACAAGGAGGGTATTCCCCCTGATCAGCAACGTCTCATCTTT 8154 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||| ||||| | || | |||| |||||| | ||||| ||||| Sbjct 8153 GCGGGGAAGCAGTTGGAGGATGGTCGTACGCTCTCCGACTACAACATTCAGAAGGAGTCG 8094 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 8093 ACCCTCCACCTCGT 8080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181791818060794