Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq972 96.9 3e-15 >seq972 Length=266462 Score = 96.9 bits (106), Expect = 3e-15 Identities = 204/299 (68%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGG 148169 ||| |||||||||||| ||||| || | ||||| ||||| || | | |||||| Sbjct 234191 GTAAATGCCGTCGATGGAGTCGTCCTTCATCGTGAGCAAGAAACAGGAGGAGAGTTGCGG 234132 Query 148170 AATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT 148229 | || || || ||| |||||||| ||||| || || | |||| ||| Sbjct 234131 GTGAGGGGTGCCGGCATTGAAGAGGGTGGGTGATGCGTGGGTGAAGTACTTTTCGGACAT 234072 Query 148230 CA-TGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGC 148288 | | || || || || || ||| | || | |||||| || ||||| || | || || | Sbjct 234071 GAGTTCG-TATGTTTCGATGGCGGCATCTACGTCGTCACCATGAATACCGACAGCAACAC 234013 Query 148289 GCATGAGCATGTGCTGTGGTCGTTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCCA 148347 |||||||||||||||| || | ||| || | |||| |||||||| ||| || || Sbjct 234012 GCATGAGCATGTGCTGAGGCCTTTCTGCGATCTTG-TTGTTGATGCGGAGGAGGTAGGAG 233954 Query 148348 TTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 ||||||||| ||| | || ||||| ||||| | || || | ||||| |||||| Sbjct 233953 CGTTCGAGGGTCTTGAAGCCGAAGTAGTTGTAGTTGAAGTCGCGGTCGTAGATGATGGC 233895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476599797077040