Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1211 96.9 4e-15 >seq1211 Length=8054 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 146880 CTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAG 146939 ||| || || || | || | ||| ||| ||||| ||||| | ||| || || | Sbjct 778 CTTCGGAAACGGCCTCGGCTCCCTCCCCAACTGAACTTTCAACGCCTCAACATGATCATT 837 Query 146940 GTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTG 146999 || || |||||||| |||| || ||||| || ||||| || || || || || Sbjct 838 ATACACATGCGCGTCACCCAAACAATGGACAAACTCTCCCGGACGGAGACCCGTGACATG 897 Query 147000 GGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCAT 147059 ||| | |||| ||| || || | |||| ||| |||||||||||||| || |||||||| Sbjct 898 GGCGATCATGATGGTTAGGAGGGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGGCCCAT 957 Query 147060 GTCCCCCGACCTCTGGTACAGCTGGCACGAGAG 147092 ||| | || | ||||| || ||||| ||||| Sbjct 958 GTCGCAGGAGCGTTGGTAGAGTTGGCAGGAGAG 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583474040049600