Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1211 116 3e-21 >seq1211 Length=8054 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAG 29899 ||||| || || ||||||||| | | |||| |||| || || || | ||| || Sbjct 782 GGAAACGGCCTCGGCTCCCTCCCCAACTGAACTTTCAACGCCTCAACATGATCATTATAC 841 Query 29900 ACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29959 || || ||||| |||| ||||||||||||||||| || || ||||| || || Sbjct 842 ACATGCGCGTCACCCAAACAATGGACAAACTCTCCCGGACGGAGACCCGTGACATGGGCG 901 Query 29960 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 30019 |||||| || ||||| | |||| ||||||||| ||||| || ||||| |||||||| Sbjct 902 ATCATGATGGTTAGGAGGGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGGCCCATGTCG 961 Query 30020 CCCGACCTCTGGTAGAGCTGACACGAGAG 30048 | || | |||||||| || || ||||| Sbjct 962 CAGGAGCGTTGGTAGAGTTGGCAGGAGAG 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406300922048088