Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3792 140 3e-28 seq2503 138 1e-27 >seq3792 Length=31585 Score = 140 bits (154), Expect = 3e-28 Identities = 292/434 (67%), Gaps = 6/434 (1%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 || ||||| ||| || ||||| |||||||| || || || | || || || | ||| Sbjct 6537 TGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCC 6596 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 || || ||||| ||||| || || | | |||||| | |||| || | | || | Sbjct 6597 ATAAAGTCAAACGGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGA 6656 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855 | ||| || |||||||| || ||||| ||||| || | ||||| || || | Sbjct 6657 CGATCAGCAACAAATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCA 6716 Query 16856 ACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTA 16915 || || | || || || || ||| || || ||| | || |||||| | |||||| Sbjct 6717 ACAGGTAATGCATCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCC 6776 Query 16916 GCAACTCGTTCCTCGGACGGTGTATGTTTAAGA---TGTTTAAACATCAGACATGCGAAA 16972 || |||| | | ||| |||||| || || |||||| ||||| || ||| Sbjct 6777 TTCACACGTTGTTGGCTAGGT---TGTTTACGAATGTGAGTAAACAAAAGACAAGCAAAA 6833 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 || ||| | || ||||| | | || | ||| ||| ||| ||||| ||||||||| Sbjct 6834 TCCGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATC 6893 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || |||||||| | |||||| || | ||| || || ||||||||||||||||| || Sbjct 6894 AAACCACGTTTCTTAAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCT 6953 Query 17093 ACGGATGCAAACGC 17106 || | ||||| || Sbjct 6954 ACTGCAGCAAAAGC 6967 >seq2503 Length=34491 Score = 138 bits (152), Expect = 1e-27 Identities = 326/481 (68%), Gaps = 20/481 (4%) Strand=Plus/Plus Query 16649 TCTTGTTTATGAACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTA 16708 ||||||| |||| |||| | ||| ||||| ||| || ||||| |||||||| Sbjct 6810 TCTTGTTCATGA----CACCAGCACGTTGATAATCAGAAACACGCTTTTCAAAAAAGTTG 6865 Query 16709 GTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATA 16766 || ||||| | || || || | ||||| || || || || |||| || || |||| Sbjct 6866 GTCTTGCCTTGAAGGGAGATCATGTCCATAAAGTCGAATGGGTTAGAGGCATTGTAAATC 6925 Query 16767 TTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACA 16826 || | | | || || || | || | | ||| || || ||||| || || || |||| Sbjct 6926 TTGTCAA--AGCCAAGGGCGACCATGAGACGATCAGCGACGAATTCAATGTACTGACACA 6983 Query 16827 TTAAT-TCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGC 16885 | || | || |||||| || || | || || ||||| |||| || ||| ||| Sbjct 6984 TCAAGGTAGC-GTTCATACCGATCAATGCCACAGGCAGAGCATCCGACAGGAATTCTTGT 7042 Query 16886 TCTATAACAACCGCTTCCTTAATAATA--CTAGCAACTCGTTCCTCGGACGGTGTATGTT 16943 || ||| | || ||||| |||||| || | || |||| | ||| | || |||| Sbjct 7043 TCGATACCGACTGCTTCTACAATAATGTCCTTG--ACGCGTTGTT--GACTGGGT-TGTT 7097 Query 16944 TAAG-ATGTT--TAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGA 17000 | | |||| | |||| ||||| || |||||| || | || ||||| | | || Sbjct 7098 TGCGGATGTGGGTGAACAAGAGACAGGCAAAATCGGTGTGAAGACCTTCGTCACGACAGA 7157 Query 17001 TAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCG 17060 | | ||| ||| || ||||| ||||||||| || ||||||||||||||||| || | Sbjct 7158 TCAATTCATTACTGAACGTCAAACCGGGCATCAAACCACGTTTCTTTAACCAAAAGATGG 7217 Query 17061 CGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGG 17120 |||||| || || |||||||| || || ||||| | ||||| |||| | ||||| | Sbjct 7218 AGGCGAATGAACCGGAAAAGAAGATGCCTTCGACAGCGGCAAAGGCGACCAGACGTTCAG 7277 Query 17121 C 17121 | Sbjct 7278 C 7278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517520233796280