Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2423 192 4e-44 >seq2423 Length=40535 Score = 192 bits (212), Expect = 4e-44 Identities = 503/769 (65%), Gaps = 35/769 (5%) Strand=Plus/Minus Query 101524 TTATTTTTCTTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAA 101583 ||||| || ||||||| ||| | ||| | |||| | | | || ||||| ||||| || Sbjct 23538 TTATTATTTCTAAACAGACATTTTCATGTCAATTTTGCTGAGAGGATTATAATTTTCCAA 23479 Query 101584 TATAATGTCATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGT 101643 | || || || || || ||||| || | || || | | | || ||||| Sbjct 23478 CACAAAATCTTCAAACTTGAAATCATCTATAGAGTCAATTTTACGATTGATCCTTAGTGT 23419 Query 101644 TGGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATA 101703 ||| || | ||||| || || | ||| ||| | ||||| | |||||| | || Sbjct 23418 TGGGAAAGACCTAGGCTCGCGTGTTACTTGCTGTTTCAATGCATCCAAGTGATCGATGTA 23359 Query 101704 GATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGC 101763 | || | ||| || |||||||| ||||| |||||||| | | ||| || || || || Sbjct 23358 AACATGTGTATCACCCATAGTATGTATAAATTCTCCAGGATCCAAATTTGTTACGTGTGC 23299 Query 101764 AATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATC 101823 |||||||| ||| || || | |||| |||||| ||||| || || |||||||||||||| Sbjct 23298 AATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAAAGGTACACCTAACCCCATATC 23239 Query 101824 AGCTGATCTTTGATACAGTTGACAGGAAAGCTT------TCCATCA-------------- 101863 |||| ||||| || ||| || || || |||| || Sbjct 23238 GCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCACGTCCACCATCTGAAGGTGGGTT 23179 Query 101864 -CAGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGA 101922 | |||||||| |||| || |||||||||| || || |||| ||||||| |||| Sbjct 23178 GGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTAAAGCCATAATAGGAATATCTGC 23119 Query 101923 AACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAAT 101982 | |||||| ||| | | | || | ||||||||| || || |||| || ||||| || Sbjct 23118 AGGATTCCAGGCAGAGAGAATAATTCGTCTATCTGTTGGATTATTTTTAATGGTATCTAT 23059 Query 101983 CAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATA------ATCGCGCCCAACACCTTT 102036 || || | |||||| |||| |||| || |||| ||||| |||| Sbjct 23058 CACTTGCTGTAATTGATCAATGCCTTGACCACTATAGTCAGTATCGCAATCAAC------ 23005 Query 102037 ATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATC 102096 || | || || || || |||||||| || ||||| || || |||||||| ||||| Sbjct 23004 GTACTTGGCCCCAAAGTGTCTCCACTGGAACCCATAGACTGGACCAAGATCACCTTCTCG 22945 Query 102097 TCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTG 102156 | | | || || || ||||| | || | ||| ||||| ||||||| || | Sbjct 22944 GCGATGAGTAAGGCCCAGCTTATCAAGGAACTCACGAGAGCCATTGCCATCCCAGATCTT 22885 Query 102157 CACGCCA-GCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTT 102215 || | ||| | || | ||| || |||| || |||||||||| | |||| Sbjct 22884 GACATTACGCTCATTCAAG-TGTTTTGAGTTAGTATCACCCTTGATAAACCAAAGAAGTT 22826 Query 102216 CTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 |||| | ||||||||| | ||||| | ||| || || | || ||||| Sbjct 22825 CTTCGAGAACACCTCTAAAGAATACACGCTTTGTGGTGAGGAGAGGAAA 22777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361233936821171