Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3799 345 5e-90 seq3792 149 7e-31 seq2503 127 2e-24 >seq3799 Length=82858 Score = 345 bits (382), Expect = 5e-90 Identities = 755/1122 (67%), Gaps = 14/1122 (1%) Strand=Plus/Minus Query 53687 ATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 53746 |||||||| || || || ||||| |||| |||||||| || || |||| | Sbjct 43819 ATTACAAAAGTGGGTAAAGCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTT 43760 Query 53747 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 53806 | ||||| | || || || ||||| |||||||| || ||||| || || |||||||| Sbjct 43759 GTATATTCGACAATTTCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGG 43700 Query 53807 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGG 53866 || |||||| | ||||| |||||||| || || || || || |||| |||||| | || Sbjct 43699 TTGCTCTTTCTATTACAAGCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGT 43640 Query 53867 GATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT--TT 53924 | ||| | || || | ||| | | ||||| ||| | | | | ||||| || Sbjct 43639 GCTTCCAAGATAGCATACCATAACTTTTGTGCCTTAATTGTC--TCTCTCGCTCTTCCTT 43582 Query 53925 CTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAG 53984 | | ||| || | ||| | | ||||||| || |||||||||| | ||| |||| Sbjct 43581 CGCGTTCATAGCTTTCATAAAGAGCTACAAACTCATCACCCCAAACATCTTGCAAACCAG 43522 Query 53985 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 54044 | ||||| ||||| | | ||||| || || | ||||| || |||| ||| |||| Sbjct 43521 GTGCTTCATTAGGACAAAAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAGA 43462 Query 54045 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 54104 |||| || | |||||| || ||| | ||| | || ||| ||| || || || | Sbjct 43461 GATCGGGTACCCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGT 43402 Query 54105 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCA 54164 ||||| | | ||| | || | | ||||| | |||||| || || | || |||| | Sbjct 43401 TCTTTCTTAAATCTAAAAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCGA 43342 Query 54165 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 54224 |||| || || ||||| || || ||||| | || | || |||||||| | || | Sbjct 43341 AGGCTCCCGGACGCTTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACAC 43282 Query 54225 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 54284 || ||| |||| | |||||| || |||||| || |||| |||||| |||| ||| Sbjct 43281 GCAGCATGGGAAGCAAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGG 43222 Query 54285 CACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATC 54344 |||||||||| ||| ||||| || || ||||| |||| || ||| || || Sbjct 43221 CACGAATATTGTGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGA 43162 Query 54345 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 54404 |||||| || ||||||||||| || || ||| ||| ||||| | || | || || Sbjct 43161 TTTTTAATGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAG 43102 Query 54405 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 54464 ||||| || ||||| || || ||||| || || || ||| || || ||||| Sbjct 43101 AGGACATCTGAGGACGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAGA 43042 Query 54465 ATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATT 54523 |||| ||||| | | ||||| ||||| || || | ||| ||||| || | || || Sbjct 43041 ATTTCTCAGACATCAAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCG-TGGATA 42983 Query 54524 CCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 54581 || | ||||||||||| ||| |||| ||||| | || | ||||| || || | Sbjct 42982 CCAATAGCGACACGCATGATAAGATGT--TGAGGACGCTCGGCAGTCTTGCCGTCAATCT 42925 Query 54582 TCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 54639 | || | |||||| ||| | ||| || || |||||| ||||||| ||||| |||| Sbjct 42924 TGAGTAGATAGGATCGTTCGAGAGTCTTGAATCCAAAAAAGTTGTACTTGAAA--TCTCT 42867 Query 54640 TTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT 54699 || |||||||| ||||||| || || | | | ||| || | ||| | Sbjct 42866 GTCATAAATAATGGCTGAGTTCAGACGTTCTGCGTTGTCCTGAACAACTTTATAGGTTGT 42807 Query 54700 ACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTT 54759 || || || || |||||||| | || ||||| |||||||| | | ||||| Sbjct 42806 GTCGGATATCATGGGGGAATGTTTGTTTGTCTTGGGATTTACATAGTTGTAGAGATCCTC 42747 Query 54760 CATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 54801 ||||||| | ||| | || |||||||| ||||||| ||| Sbjct 42746 AATCACTTGAGAAAAGACCTTCTTTGTTTCCTTGTGTAAATT 42705 Score = 176 bits (194), Expect = 5e-39 Identities = 533/822 (65%), Gaps = 21/822 (3%) Strand=Plus/Minus Query 52838 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTT 52897 ||||| | ||| ||||| ||||| || | || ||| || ||||| ||||||||| Sbjct 44732 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAGCCATAAAAGTGCATACTT 44673 Query 52898 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 52957 || || || | | | || || || ||| ||| |||| | |||||||||||| ||| Sbjct 44672 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 44613 Query 52958 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 53017 |||| || | ||| || ||||| | | || || || | |||||||| | ||| Sbjct 44612 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGCTGAGAGATTTCCCAGACAGTC 44553 Query 53018 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGT------ATTCTGAATAGATCCACCA 53071 || || | | || | | || || || |||| ||| || | ||| |||||| Sbjct 44552 TTGTAGAGTTCTTTGAGGTGTT---GAGGGATTGTGGGTACATTTTGGACAGACCCACCA 44496 Query 53072 TCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTC-TCTCGGTTAAAACTCT 53130 || |||| ||| | ||||||| ||||| ||||| ||| | | || ||| | | Sbjct 44495 TCGGCCATGATCATGTTCTTGACTTCATCGTTCCA-AATACCCATATCAACCAAATCACG 44437 Query 53131 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 53190 ||| | || || || | |||| |||| || || | || | || || |||| || Sbjct 44436 AAGTAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTT 44377 Query 53191 ACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 53250 | || || || || | | ||||||| ||||| ||||||| || || || || || Sbjct 44376 AGAAGTGTAAGGCTCAAAACACTCATTGAAACCCAACATTTGAGAGGTAGAGGCGGTAGG 44317 Query 53251 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGG 53310 |||||| || | ||| | ||| | || |||| | || || || ||||| | Sbjct 44316 CATAGGGGCTAACAAAAGTGAATTGCGAACGCCGTGCTTGGCTATCTTTTCCTTTAGTGA 44257 Query 53311 TTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACC--- 53367 |||| | ||||||| | ||| || ||||| || || Sbjct 44256 AGCCCAGTCCCAAAGAGAGGTGGGTGTCACATTCCACATGTCGTATTGTAAGATGCCCTT 44197 Query 53368 -GTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 53426 | ||| || || ||| |||| || || || ||||| | ||| || || | ||| | Sbjct 44196 GGATACAGGACTA----CCTTCATAAGTTTCATAAGGTCCGTACTTTTCGGCCAATTCGC 44141 Query 53427 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTG 53486 | || || |||||| | | ||| || ||||| ||||| | |||||| | || | Sbjct 44140 ATGAGGCTTCCAATGCAGCATGATAGATAGTTTCAAAGATTTGAATATTTAATTGTTTGG 44081 Query 53487 CTTCCAGGCTA-TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 53545 ||| |||| | ||||| || ||| |||| || || | ||||||||| ||||| ||| Sbjct 44080 CTT-CAGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCTGCTAAACCTTGGACA 44022 Query 53546 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 53605 || | ||||||||| | ||||||||| || || |||| ||||| | ||| ||||| Sbjct 44021 CCTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAG 43962 Query 53606 TTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTG 53647 || ||||| ||||| || || | |||||| ||| || ||| Sbjct 43961 TTGATATCAATAATCTTGTTCAAGTTTCTAGTAATCACCTTG 43920 >seq3792 Length=31585 Score = 149 bits (164), Expect = 7e-31 Identities = 290/426 (68%), Gaps = 2/426 (0%) Strand=Plus/Plus Query 23859 ACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGAT 23918 ||||| ||||| ||||| || || || |||| | ||| || | ||||| || || | Sbjct 6549 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCCATAAAGTCAAAC 6608 Query 23919 GGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACA 23978 ||||| || | |||| ||| | | || || | || || | | ||| || ||| Sbjct 6609 GGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGACGATCAGCAACA 6668 Query 23979 AACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 24038 || || || ||| ||||| | ||||||| || || | | ||| || | || Sbjct 6669 AATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCAACAGGTAATGCA 6728 Query 24039 ACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCT 24098 |||| | ||||| ||||||||| || || || |||||||| | || || | Sbjct 6729 TCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCCTTCACACGTTGT 6788 Query 24099 TCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACC 24157 | || ||| | | || | | || |||||| | ||| || ||||| || ||||| Sbjct 6789 TGGCTAGGTTGTTTACGA-ATGTGAGTAAACAAAAGACAAGCAAAATCCGTATGAAGACC 6847 Query 24158 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 24217 ||||| | || ||| ||||| || ||| || | |||||||| | ||||| || || Sbjct 6848 TTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCAAACCACGTTTCTT 6907 Query 24218 AAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 24277 ||||||||| || || |||||||| ||||||||||| || ||||||||||| ||||| || Sbjct 6908 AAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCTACTGCAGCAAAAGC 6967 Query 24278 AATAAG 24283 || ||| Sbjct 6968 AACAAG 6973 Score = 141 bits (156), Expect = 1e-28 Identities = 225/322 (70%), Gaps = 3/322 (1%) Strand=Plus/Plus Query 24355 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 24414 |||| || |||||| || || | |||||| | | |||||| | ||| ||||||| Sbjct 7103 TTGTATCAATAGCAGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGTATCAA 7162 Query 24415 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 24474 |||||||||| || |||| || || || |||||||| |||||||| || || |||| Sbjct 7163 TCAAAAGACTGTATGTTTCAGAGTGGATATTTTCAATCATGATTTGAAAGCCATAAAAAC 7222 Query 24475 ATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTA 24534 || |||| || | ||| | ||||| |||||| || | ||||||||||| || | Sbjct 7223 ATTTAGCTTCAGGAATTTTGACTTCATCACAAAAATTTTGCACCAAATTTTCATTTACAA 7282 Query 24535 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 24594 | || ||| | ||||| || ||||| ||| | |||||| || || | | Sbjct 7283 TACCATCAGAGCTCGCAAAGAAAGCCAAAACACGAGAAATAAAAAATCGCTCATTCTCAG 7342 Query 24595 TTAGTTTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 24651 | | ||| || ||||||||| ||| || || ||| | |||||| ||||||||| Sbjct 7343 TCATTTTGTTTTCCCAATCATTTTGGTCTCTACTTAAATCTATTTCTTCAGCTGTCCAAA 7402 Query 24652 ATGATGCCTCTGCCTTTTTATA 24673 | ||||| |||||||| ||||| Sbjct 7403 AAGATGCTTCTGCCTTCTTATA 7424 >seq2503 Length=34491 Score = 127 bits (140), Expect = 2e-24 Identities = 554/882 (63%), Gaps = 57/882 (6%) Strand=Plus/Plus Query 23846 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 23905 ||| || ||| ||||| ||||| ||||| || || || |||| | || || | || Sbjct 6832 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 6891 Query 23906 CATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAA-ATCA 23964 ||| || ||| |||| || | |||| || || ||| | || |||| || || | Sbjct 6892 CATAAAGTCGAATGGGTTAGAGGCATTGTAAAT-CTTGTCAAAGCCAAGGGCGACCATGA 6950 Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024 | ||| ||||| || || || || ||||| | ||||| || || | | Sbjct 6951 GACGATCAGCGACGAATTCAATGTACTGACACATCAAGGTAGCGTTCATACCGATCAATG 7010 Query 24025 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 24084 || || ||||| | | || ||||||||||| ||| ||| || ||| ||||| | Sbjct 7011 CCACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACTGCTTCTACAATAAT-G 7069 Query 24085 ATCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 24143 ||| || || || ||| ||| | | | || | |||| | ||| || ||| Sbjct 7070 TCCTTGACGCGTTGTTGACTGGGTTGTTTGCGGATGTGGGTGAACAAGAGACAGGCAAAA 7129 Query 24144 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 24203 ||| ||| ||||| ||||| | || || ||||| || ||||| | |||||||| Sbjct 7130 TCGGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCATC 7189 Query 24204 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 24263 | ||||| || || | |||||| ||||| || ||||| || |||||||| || ||||| Sbjct 7190 AAACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTTCG 7249 Query 24264 ACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATG-TATCCACTTTTG 24322 || || |||||||| | || | ||| || | || || ||| ||||| || Sbjct 7250 ACAGCGGCAAAGGCGACCAGACGTTCAGCAAAGGATTCGTTG-GATGAGATCCATTTGAA 7308 Query 24323 AGCCCAATCGGCCTTCTTTTTTACACAAGGCA---------------------------- 24354 ||||||||||||||| || | ||| || | Sbjct 7309 AGCCCAATCGGCCTTACGCTTAATACAGGGAACTAGAAGAGAGATGAATACGATATCGAA 7368 Query 24355 --------------------TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACT 24394 | || || |||||| |||||| | ||||| | | Sbjct 7369 TGGGGATCGATTGTACTTACTGGTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTT 7428 Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||||| || ||||||||||| ||||| || |||| | ||| ||||||||||| Sbjct 7429 ATCTTTAATGTAGGTATCAATCAAGAGACTGTAAGTTTCAGCATGGATGTTTTCAATCAT 7488 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 || || || || || ||||| | || |||| ||||| ||||| |||||| || Sbjct 7489 GATCTGGAAACCATAAAAACACTTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTG 7548 Query 24515 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 24574 | | || ||||||||||| || || || | | ||||| || ||||| ||| | || Sbjct 7549 TACCAAGTTTTCATTCACGATACCATCTGAGCCAGCAAAGAAGGCCAAGACACGCGAGAT 7608 Query 24575 AAAATATTTTTCG---TCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATC 24631 ||| | |||| |||| || || | |||||||| ||| || | || Sbjct 7609 AAAGAAACGTTCGTTCTCTGACATTTTGTTTTCCCAATCATGCTGATCCTTGCTCAAGTC 7668 Query 24632 CACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 24673 | ||||| | |||||||| || || || ||||||||||| Sbjct 7669 AATCTCTTCTGCGGTCCAAAAGGAAGCTTCGGCCTTTTTATA 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593692500220080