Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq3880 120 3e-22 seq2672 93.3 4e-14 seq3785 82.4 7e-11 >seq3880 Length=130811 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||||||| |||| || | || |||||||| || || ||| ||| | | Sbjct 118626 ATGCAAATATTCGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCC 118685 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || |||||| || ||||||||| | || ||||||| Sbjct 118686 GATACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 118745 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||||||||||||||||| ||||||||||| |||||| || | | || | |||||| | Sbjct 118746 CAAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAG--CGATTATA 118803 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||| || |||||||| || || || |||| ||||| ||| |||| || Sbjct 118804 ATATACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGG 118852 >seq2672 Length=76086 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099 |||||||| || |||||||||||| | || |||||||||| | || |||||||| Sbjct 17992 AAGCAAAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAACAACGTCTCATCTTTGCA 17933 Query 29100 GGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACT 29159 ||||||||| |||||||| | || | || || |||||||| || ||||| || Sbjct 17932 GGCAAACAATTGGAAGATGGCCGTACCCTTAGTGACTATAATATTCAAAAAGAATCAACC 17873 Query 29160 CTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| |||| || || ||||||| || Sbjct 17872 CTTCATCTGGTACTAAGACTACGAGGTGG 17844 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| ||||| |||||| | || |||||| |||||||| || ||||| || ||| Sbjct 17758 AAAATTCAAGATAAGGAAGGTATCCCACCAGATCAGCAAAGACTAATTTTTGCTGGTAAA 17699 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| |||||| ||| | ||||||||||| || || ||||| || ||||| Sbjct 17698 CAACTTGAAGATGGTCGTACTTTAAGTGATTACAATATACAAAAAGAATCAACGCTTCAT 17639 Query 29166 ATGGTGTTACGATTACGAGGAGG 29188 |||| ||||| ||| |||| || Sbjct 17638 TTGGTATTACGTTTAAGAGGTGG 17616 >seq3785 Length=127354 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 || |||||| | ||||||||||| || || ||| |||||||| ||| || |||| Sbjct 87409 GACCAACAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGTACTTTGAGCGAT 87350 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||||| ||||| |||||||| ||||||||| |||| Sbjct 87349 TACAACATTCAAAAGGAATCCACTCTTCACTTGGT 87315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428315531027255