Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2543 95.1 1e-14 seq175 95.1 1e-14 seq3789 86.0 5e-12 >seq2543 Length=10996 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | |||||| || ||||| || || ||||| | ||||| || | || Sbjct 1455 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1396 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || | ||||| || ||| |||| || | ||| ||||| || | |||||||||||| Sbjct 1395 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1336 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||||| || || | | | | ||||| | ||| ||||| ||||||||| Sbjct 1335 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1276 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | || ||||| || || ||||| Sbjct 1275 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1244 >seq175 Length=1843 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | |||||| || ||||| || || ||||| | ||||| || | || Sbjct 1227 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1168 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || | ||||| || ||| |||| || | ||| ||||| || | |||||||||||| Sbjct 1167 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1108 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||||| || || | | | | ||||| | ||| ||||| ||||||||| Sbjct 1107 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1048 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | || ||||| || || ||||| Sbjct 1047 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | |||||| || ||||| || || ||||| | ||||| || | || Sbjct 1683 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1624 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || | ||||| || ||| |||| || | ||| ||||| || | |||||||||||| Sbjct 1623 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1564 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||||| || || | | | | ||||| | ||| ||||| ||||||||| Sbjct 1563 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1504 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | || ||||| || || ||||| Sbjct 1503 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1472 >seq3789 Length=135228 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | |||||| |||||||||||||| ||||| | Sbjct 104632 CCACCACGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCACTC 104573 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || | || || ||||| || || ||| | || | | || || || || Sbjct 104572 AAAGTACGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGA 104513 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||| ||||| || || | | | | ||||| || || Sbjct 104512 ATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTCTCAATACTATCAGAGGATTCGACC 104453 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 |||| || || |||||||| || | ||||| ||||| ||||||||||| Sbjct 104452 TCCAAAGTGATTGTCTTGCCAGTAAGTGTTTTAACAAAGATTTGCATTTT 104403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422239021420436