Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2423 208 5e-49 >seq2423 Length=40535 Score = 208 bits (230), Expect = 5e-49 Identities = 484/729 (66%), Gaps = 37/729 (5%) Strand=Plus/Minus Query 96930 AGGGTTATAGTTTTCCAGAATAATGTCATTTGCTTTAAAATCATCAATAGATGCAATCTT 96989 ||| ||||| ||||||| | || || | || |||||||| ||||| |||| || Sbjct 23496 AGGATTATAATTTTCCAACACAAAATCTTCAAACTTGAAATCATCTATAGAGTCAATTTT 23437 Query 96990 TCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGC 97049 | | | ||||||||||||||| ||| || || || | |||| | | | || Sbjct 23436 ACGATTGATCCTTAGTGTTGGGAAAGACCTAGGCTCGCGTGTTACTTGCTGTTTCAATGC 23377 Query 97050 ATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAAC 97109 ||| | ||||| | |||| || | ||| || | ||| || ||||||||||||||| | Sbjct 23376 ATCCAAGTGATCGATGTAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAGGATC 23317 Query 97110 TAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGG 97169 |||| || || || || ||||| | ||| || || | |||| |||||| |||||||| Sbjct 23316 CAAATTTGTTACGTGTGCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAAAGG 23257 Query 97170 CACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTT------TCC 97223 || |||| |||||||| |||| ||||| | | ||| || || || ||| Sbjct 23256 TACACCTAACCCCATATCGCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCACGTCC 23197 Query 97224 ATCA---------------CACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 | || | ||||||||||||| || ||||||| || || || || Sbjct 23196 ACCATCTGAAGGTGGGTTGGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTAAAGC 23137 Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 ||| | |||| |||| |||||| ||| | | | |||| |||||| ||||| || Sbjct 23136 CATAATAGGAATATCTGCAGGATTCCAGGCAGAGAGAATAATTCGTCTATCTGTTGGATT 23077 Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388 | | ||||||| || | |||| ||||||||||| ||||| |||| ||| || Sbjct 23076 ATTTTTAATGGTATCTATCACTTGCTGTAATTGATCAATGCCTTGACCACTATA---GTC 23020 Query 97389 CTTAAGACCTTGA---TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCC 97445 || | | | || | || ||||| || ||||| ||||| ||||| || || || Sbjct 23019 AGTATCGCAATCAACGTACTTGGCCCCAAAGTGTCTCCACTGGAACCCATAGACTGGACC 22960 Query 97446 AAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATC 97501 ||| || |||||| | || | | || |||||||| |||| || ||| | Sbjct 22959 AAGATCACCTTCTCGGCGATGAGTAAGGCCCAGCTTATC----AAGGAACTCACGAGAGC 22904 Query 97502 CATTTGCATCCCAAATGTGCACACCA-GATGCTGCAAGCTCTTTGCTGTCAGTAGATCCT 97560 |||| ||||||| || | ||| | | | | |||| | ||| || |||| || Sbjct 22903 CATTGCCATCCCAGATCTTGACATTACGCTCATTCAAG-TGTTTTGAGTTAGTATCACCC 22845 Query 97561 CTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAG 97620 |||||||||| | | |||||| | ||||||||| | ||||| | ||| || || | | Sbjct 22844 TTGATAAACCAAAGAAGTTCTTCGAGAACACCTCTAAAGAATACACGCTTTGTGGTGAGG 22785 Query 97621 AGAGGAAAA 97629 ||||||||| Sbjct 22784 AGAGGAAAA 22776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346767428167970