Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2543 95.1 8e-15 seq175 95.1 8e-15 seq2672 86.0 4e-12 >seq2543 Length=10996 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 |||||| || || |||||||| || || |||| | || || || || || || || || Sbjct 1435 TTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCTAATTGTTTACCAGCAAA 1376 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 |||||| ||||| ||||| || | || |||||||| ||||||||||| | | Sbjct 1375 AATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTT 1316 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || ||| | || ||||| |||| || |||||||| || ||||| || || || Sbjct 1315 TTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGAC 1256 Query 34378 AAAGATCTGCAT 34389 || |||||||| Sbjct 1255 GAAAATCTGCAT 1244 >seq175 Length=1843 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 |||||| || || |||||||| || || |||| | || || || || || || || || Sbjct 1207 TTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCTAATTGTTTACCAGCAAA 1148 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 |||||| ||||| ||||| || | || |||||||| ||||||||||| | | Sbjct 1147 AATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTT 1088 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || ||| | || ||||| |||| || |||||||| || ||||| || || || Sbjct 1087 TTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGAC 1028 Query 34378 AAAGATCTGCAT 34389 || |||||||| Sbjct 1027 GAAAATCTGCAT 1016 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 |||||| || || |||||||| || || |||| | || || || || || || || || Sbjct 1663 TTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCTAATTGTTTACCAGCAAA 1604 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 |||||| ||||| ||||| || | || |||||||| ||||||||||| | | Sbjct 1603 AATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTT 1544 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || ||| | || ||||| |||| || |||||||| || ||||| || || || Sbjct 1543 TTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGAC 1484 Query 34378 AAAGATCTGCAT 34389 || |||||||| Sbjct 1483 GAAAATCTGCAT 1472 >seq2672 Length=76086 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || || || ||||| || | || |||||| || || || ||||| Sbjct 17844 CCACCTCGTAGTCTTAGTACCAGATGAAGGGTTGATTCTTTTTGAATATTATAGTCACTA 17903 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || ||||| || |||||||| || ||||| || || || || || Sbjct 17904 AGGGTACGGCCATCTTCCAATTGTTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGG 17963 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | || || || ||||||||||||| | | | || ||| | ||||| || Sbjct 17964 ATACCTTCTTTATCTTGGATCTTTTGCTTTACGTTGTCAATACTATCAGAAGATTCAACT 18023 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || ||||| || || ||||| ||||||||||| ||||| Sbjct 18024 TCCAAAGTAATAGTTTTACCAGTAAGAGTCTTCACAAAGATTTGCAT 18070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323056561297760