Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq3792 212 6e-50 >seq3792 Length=31585 Score = 212 bits (234), Expect = 6e-50 Identities = 320/448 (71%), Gaps = 8/448 (2%) Strand=Plus/Plus Query 15947 TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCC 16006 ||||| ||| ||| | ||||||||| || || || || |||| | |||||| | ||| Sbjct 6537 TGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCC 6596 Query 16007 ATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAAT 16066 ||||| ||||| ||||| ||| ||| ||||||| | ||||| |||| |||| Sbjct 6597 ATAAAGTCAAACGGATTCGTTGCCATATAAATTTTATCGAA-CCCAAGAGCAACCATAAG 6655 Query 16067 -CTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTT 16125 | ||| || |||||||| || || || ||| ||| | | ||||| || || ||| Sbjct 6656 ACGATCAGCAACAAATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGC 6715 Query 16126 AACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATC 16185 |||||| | ||| || ||||| || | | ||| ||| || ||||| || || ||||| Sbjct 6716 AACAGGTAATGCATCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATC 6775 Query 16186 TCTTACTACACTATTTAACGGAGG--GTTTAATAA-GTGTTTAAACATTATACAAGCAAA 16242 ||| |||| | | ||| ||||| || ||| |||||| | ||||||||| Sbjct 6776 -CTTC--ACACGTTGTTGGCTAGGTTGTTTACGAATGTGAGTAAACAAAAGACAAGCAAA 6832 Query 16243 ATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCAT 16302 ||| ||| | |||||||| | || || || || || ||| || | ||| ||||| Sbjct 6833 ATCCGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCAT 6892 Query 16303 TAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTC 16362 | || ||||| |||| |||||| |||| ||||||||| |||||||||||||||||||| Sbjct 6893 CAAACCACGTTTCTTAAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTC 6952 Query 16363 AACTGCGGCAAATGCAACCAATCGCTCA 16390 ||||| ||||| ||||| | |||||| Sbjct 6953 TACTGCAGCAAAAGCAACAAGACGCTCA 6980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462489331130600