Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2423 145 6e-30 >seq2423 Length=40535 Score = 145 bits (160), Expect = 6e-30 Identities = 378/582 (65%), Gaps = 21/582 (4%) Strand=Plus/Plus Query 20214 AGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT 20273 ||| || ||| | ||||| || ||||| || || |||||||| ||||| || | || || Sbjct 22947 AGAAGGTGATCTTGGTCCAGTCTATGGGTTCCAGTGGAGACACTTTGGGGCCAAGTACGT 23006 Query 20274 TGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 ||| | || | ||| ||| ||||| | ||||||||||| | || || || Sbjct 23007 TGATTGCGATACTGACTATAGTGGTCAAGGCATTGATCAATTACAGCAAGTGATAGATAC 23066 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 ||||||| || |||| || ||| |||||||| | | |||||||| || |||| | Sbjct 23067 CATTAAAAATAATCCAACAGATAGACGAATTATTCTCTCTGCCTGGAATCCTGCAGATAT 23126 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA------ 20447 ||| | |||||||| ||||| |||||| | || || ||||| ||| | || Sbjct 23127 TCCTATTATGGCTTTACCTCCTTGTCATGCTTTTTGTCAGTTTTATGTTTCCAACCCACC 23186 Query 20448 ---------------TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGG 20492 | | || | || ||| | ||||| ||||| |||||||| Sbjct 23187 TTCAGATGGTGGACGTGCTAAACTATCTTGTGTGCTTTATCAGCGATCTTGCGATATGGG 23246 Query 20493 ACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGT 20552 | ||||| ||||| |||||||| |||||||| | || ||||||||||| || Sbjct 23247 GTTAGGTGTACCTTTTAATATTGCTTCCTATGCGCTCTTGACTCGCATGATTGCACACGT 23306 Query 20553 TACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAA 20612 ||| |||| | | || || || | || || || || || | ||| ||||| | | Sbjct 23307 AACAAATTTGGATCCTGGAGAATTTATACATACTATGGGTGATACACATGTTTACATCGA 23366 Query 20613 TCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCG 20672 ||| | || | || ||| || ||||||| | || | |||||||| || | Sbjct 23367 TCACTTGGATGCATTGAAACAGCAAGTAACACGCGAGCCTAGGTCTTTCCCAACACTAAG 23426 Query 20673 CATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGG 20732 || | ||| | || | ||| | ||||| || ||| ||||||||||| ||| Sbjct 23427 GATCAATCGTAAAATTGACTCTATAGATGATTTCAAGTTTGAAGATTTTGTGTTGGAAAA 23486 Query 20733 TTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTA 20774 ||||||||| | | |||| ||| ||||||||||||| Sbjct 23487 TTATAATCCTCTCAGCAAAATTGACATGAAAATGTCTGTTTA 23528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399164924119345