Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3799 104 5e-17 >seq3799 Length=82858 Score = 104 bits (114), Expect = 5e-17 Identities = 451/698 (65%), Gaps = 23/698 (3%) Strand=Plus/Plus Query 248762 TTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACG 248821 ||||||||||||| | | ||| || || ||| || | || |||||| ||||| Sbjct 42823 TTCAGGACAACGCAGAACGTCTGAACTCAGCCATTATTTATGACAGAGATTTCAAGTACA 42882 Query 248822 ATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCG 248881 | || |||| ||||| || || || ||| ||||| ||||| ||||| ||||||| | Sbjct 42883 ACTTTTTTGGATTCAAGACTCTCGAACGATCCTATCTACTCAAGATTGACGGCAAGACTG 42942 Query 248882 TGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAG 248941 || || ||| || | | ||||| || ||| | || || ||| || || || | Sbjct 42943 CCGAGCGTCCTCAACATCTTATCATGCGTGTCGCTATTGGTATCCACGGTGAAGATATTG 43002 Query 248942 AGAGCGTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACC 248999 | || ||| | ||||| |||| | ||| ||| | | || ||||||| || Sbjct 43003 A-CGC-TGCAATTGAGACTTACAACTTGATGTCTGAGAAATTCTTTACTCATGCCAGTCC 43060 Query 249000 GACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCA 249058 || | ||||| |||||||| | || | |||| || ||| ||||| | || ||| Sbjct 43061 CACTTTGTTCAATGCCGGTACACCTCGTC-CTCAGATGTCCTCTTGCTTCTTGCTCACCA 43119 Query 249059 TGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG-GCGAAGATTTCT 249117 || | || || || | || ||||| ||||| || ||||| | | || | ||||| Sbjct 43120 TGAAGGAAGATTCAATTGAAGGCATCTATGAAAC-ATTAAAAATCTGTGCCCAAATTTCG 43178 Query 249118 AAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATC 249177 ||| || || || ||||||||| | | ||| || || || || || || || || Sbjct 43179 AAAACTGCAGGTGGTATCGGTCTCAACATTCACAATATTCGTGCCAATGGATCCTATATT 43238 Query 249178 AAAGGTACAAATGGGGTCAGT--GATGGTATCGTACCCCTCCTTCGATGCTTTGAGT-CC 249234 ||||||||| ||| | | ||||| | | ||| | || || || || | | | Sbjct 43239 GCCGGTACAAAT--GGTTATTCGAATGGTTTGCTTCCCATGCTGCG-TGTGTTCAATAAC 43295 Query 249235 AC----CGCCAGGTTCATCAACCAGGC--CGGGCGCCGAAAGGGGTCGTTCGCCATGTAT 249288 || || | || ||||| ||| | ||| | ||| | |||||||||||| Sbjct 43296 ACAGCACGTTATGTCGATCAAGGTGGCAACAAGCGTC---CGGGAGCCTTCGCCATGTAT 43352 Query 249289 TTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAAC 249348 | || ||||| || ||||| || || | || || | ||||||| || || Sbjct 43353 CTTGAGCCATGGCATGCGGATATCTTTACCTTTTTAGATTTAAGAAAGAACTTTGGTAAG 43412 Query 249349 GAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGC 249408 || || ||||| ||||| | || || | ||| ||||| |||| | ||||||| Sbjct 43413 GATGAAATCAGAGCCCGTGATTTGTTTTATGCCCTTTGGGTACCCGATCTCTTCATGCAA 43472 Query 249409 CGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCC 249446 || ||||||| || || |||||| | || ||| ||| Sbjct 43473 CGTGTCAAGGACGGTGGGGATTGGTCTCTCTTTTGTCC 43510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073712456324928