Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2503 138 2e-27 seq3792 125 1e-23 >seq2503 Length=34491 Score = 138 bits (152), Expect = 2e-27 Identities = 299/444 (67%), Gaps = 5/444 (1%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || |||||||| || || ||||| ||||||||| ||| ||||||| ||||| || ||| Sbjct 7266 GTCGCCTTTGCCGCTGTCGAAGGCATCTTCTTTTCCGGTTCATTCGCCTCCATCTTTTGG 7207 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | ||| | |||| ||| | || | | ||||| || || | | | ||| Sbjct 7206 TTAAAGAAACGTGGTTTGATGCCCGGTTTGACGTTCAGTAATGAATTGATCTGTCGTGAC 7147 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 ||||||||||| ||| ||||| || | |||| | | | | | | |||| Sbjct 7146 GAAGGTCTTCACACCGATTTTGCCTGTCTCTTGTTCACCCACA--TCCGCAAACAACCCA 7089 Query 102098 -TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156 |||| | | | | || ||| | ||||| ||| | || ||||||||||| || Sbjct 7088 GTCAACA--ACGCGTCAAGGACATTATTGTAGAAGCAGTCGGTATCGAACAAGAATTCCT 7031 Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216 | | | | |||||||| ||| | || |||||| | |||||| | |||||||| Sbjct 7030 GTCGGATGCTCTGCCTGTGGCATTGATCGGTATGAACGCTACCTTGATGTGTCAGTACAT 6971 Query 102217 TGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTAC 102276 |||||| || || ||| || |||| | | || | || ||| || |||| | Sbjct 6970 TGAATTCGTCGCTGATCGTCTCATGGTCGCCCTTGGCTTTGACAAGATTTACAATGCCTC 6911 Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336 ||||| ||| || ||||||| || ||||| | |||||||||||||||||||| Sbjct 6910 TAACCCATTCGACTTTATGGACATGATCTCCCTTCAAGGCAAGACCAACTTTTTTGAAAA 6851 Query 102337 GAGAGTCGCCGAGTATCAACGTGC 102360 | | || | || ||||||||||| Sbjct 6850 GCGTGTTTCTGATTATCAACGTGC 6827 >seq3792 Length=31585 Score = 125 bits (138), Expect = 1e-23 Identities = 296/445 (67%), Gaps = 3/445 (1%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 ||||||| ||||||||||| ||||| || |||||| ||| |||| || || || || | Sbjct 6972 TTGTTGCTTTTGCTGCAGTAGAAGGTATATTCTTTTCTGGCTCATTTGCCTCTATCTTTT 6913 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | ||||| | ||| | |||| ||| | || | ||||| || |||| | | | Sbjct 6912 GGCTTAAGAAACGTGGTTTGATGCCCGGTTTGACTTTTAGTAATGAATTGATTTGTCGTG 6853 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 |||||||||||||| || ||||| || | |||| | | || || | | || Sbjct 6852 ACGAAGGTCTTCATACGGATTTTGCTTGTCTTTTGTTTACTCA--CATTCGTAAACAACC 6795 Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155 | | | | || | | || ||| | | ||||| || | |||||||| ||||| Sbjct 6794 TAGCCA-ACAACGTGTGAAGGATATTATAATGGAAGCTGTAGGTATTGAACAGGAATTCT 6736 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215 | || | | | | |||||| ||| | || ||||| | | |||||| | || |||| Sbjct 6735 TAACTGATGCATTACCTGTTGCATTGATTGGTATGAATTCTACTTTGATGTGTCAATACA 6676 Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTA 102275 |||||||||| || ||| || |||||| | || | || || |||| | | Sbjct 6675 TTGAATTTGTTGCTGATCGTCTTATGGTTGCTCTTGGGTTCGATAAAATTTATATGGCAA 6616 Query 102276 CCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAA 102335 | || || || || ||||||| ||||| || | ||||||||||||||||||| Sbjct 6615 CGAATCCGTTTGACTTTATGGACATGATTTCACTGCAAGGGAAGACCAACTTTTTTGAAA 6556 Query 102336 AGAGAGTCGCCGAGTATCAACGTGC 102360 || | || | || ||||| ||||| Sbjct 6555 AGCGTGTTTCTGATTATCAGCGTGC 6531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989534285464555