Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3799 345 5e-90 seq3792 168 8e-37 seq2503 149 8e-31 >seq3799 Length=82858 Score = 345 bits (382), Expect = 5e-90 Identities = 839/1259 (67%), Gaps = 20/1259 (2%) Strand=Plus/Minus Query 62925 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCC 62984 |||||||| || || || | ||| |||| ||||| || || || |||| | Sbjct 43819 ATTACAAAAGTGGGTAAAGCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTT 43760 Query 62985 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 63044 | ||||| | || || || ||||| |||||||| || || || || || |||||||| Sbjct 43759 GTATATTCGACAATTTCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGG 43700 Query 63045 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63104 || |||||| | ||||| |||||||| || || || || || |||| |||||| | || Sbjct 43699 TTGCTCTTTCTATTACAAGCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGT 43640 Query 63105 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT 63164 | ||| | || || | ||| | | | ||||| ||| | | | ||| | ||| Sbjct 43639 GCTTCCAAGATAGCATACCATAACTTTTGTGCCTTAATTGTCTCTCTCGCTCTTCCTTCG 43580 Query 63165 CTTTCGTATAGAGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAG 63222 | ||| |||| | ||| | | | ||||| || |||||||||| | ||| | || Sbjct 43579 CGTTC--ATAGCTTTCATAAAGAGCTACAAACTCATCACCCCAAACATCTTGCAAACCAG 43522 Query 63223 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63282 | ||||| ||||| | | ||||| || || | ||||| || |||| ||| |||| Sbjct 43521 GTGCTTCATTAGGACAAAAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAGA 43462 Query 63283 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTAT 63342 |||| || | |||||| || ||| | ||| | | ||| ||| || || || | Sbjct 43461 GATCGGGTACCCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGT 43402 Query 63343 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63402 ||||| | | ||| | || | | ||||| | |||||| || || | || ||||| | Sbjct 43401 TCTTTCTTAAATCTAAAAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCGA 43342 Query 63403 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63462 |||| || || ||||| || || ||||| | || | || |||||||| | || | Sbjct 43341 AGGCTCCCGGACGCTTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACAC 43282 Query 63463 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGG 63522 || ||| |||| | ||| || || |||||| ||||||| |||||| |||| ||| Sbjct 43281 GCAGCATGGGAAGCAAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGG 43222 Query 63523 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63582 |||||||||| ||| ||||| || || ||||| |||| || ||| || || Sbjct 43221 CACGAATATTGTGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGA 43162 Query 63583 GTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGC 63642 |||||| || |||||||||||||| || ||| || ||||| | || | || || Sbjct 43161 TTTTTAATGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAG 43102 Query 63643 TAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63702 ||||| || |||||| || || ||||| || || || ||| || || ||||| Sbjct 43101 AGGACATCTGAGGACGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAGA 43042 Query 63703 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATT 63761 |||| ||||| | | ||||| |||||||| || | ||| ||||| || | || || Sbjct 43041 ATTTCTCAGACATCAAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCG-TGGATA 42983 Query 63762 CCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTT 63819 || | ||||||||||| ||| |||| ||||| | || || | ||| || || | Sbjct 42982 CCAATAGCGACACGCATGATAAGATGT--TGAGGACGCTCGGCAGTCTTGCCGTCAATCT 42925 Query 63820 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 63877 | | | |||||| ||| | ||| || || |||||| ||||||| ||||| |||| Sbjct 42924 TGAGTAGATAGGATCGTTCGAGAGTCTTGAATCCAAAAAAGTTGTACTTGAAA--TCTCT 42867 Query 63878 TTCGTAAATAATAACCGAATT--GAGCTTAT-CCTTATATTTGTTAACTATATCCATGGT 63934 || |||||||| | || || || || | | || | | |||| ||| ||| Sbjct 42866 GTCATAAATAATGGCTGAGTTCAGACGTTCTGCGTTGTCCTGAACAACTTTAT---AGGT 42810 Query 63935 AATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63994 | || || || || |||||||| | || ||||| ||||||||| | | ||| Sbjct 42809 TGTGTCGGATATCATGGGGGAATGTTTGTTTGTCTTGGGATTTACATAGTTGTAGAGATC 42750 Query 63995 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCT 64054 ||| ||||||| | ||| | || |||||||||||||||| ||| || || || | Sbjct 42749 CTCAATCACTTGAGAAAAGACCTTCTTTGTTTCCTTGTGTAAATTACTAATTGCAATACG 42690 Query 64055 GGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGC 64114 || || | | || || || ||||| | || || | || || |||| || || Sbjct 42689 AGCAGCCAAGAGTGCGTAGTCGGGATGACGAGTGGTCATATATGCAGCGGTTTCAGCAGC 42630 Query 64115 CAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAG 64173 || |||| | ||| || || |||||||| | || | || |||||||| || || Sbjct 42629 AAGGTTGTCAAGTTCAACAGTAGTTACTCCTTCGTAAACACCAGAAATAACCTGCACAG 42571 Score = 165 bits (182), Expect = 1e-35 Identities = 529/821 (64%), Gaps = 19/821 (2%) Strand=Plus/Minus Query 62076 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 62135 ||||| | ||| ||||| ||||| || | || ||| || ||||| |||||||| Sbjct 44732 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAGCCATAAAAGTGCATACTT 44673 Query 62136 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 62195 || || || | | | || || || ||| ||| |||| | |||||||||||| ||| Sbjct 44672 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 44613 Query 62196 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTT 62255 |||| || | ||| || ||||| | | || || || | |||||||| | ||| Sbjct 44612 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGCTGAGAGATTTCCCAGACAGTC 44553 Query 62256 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGT------ATTCTGAATGGATCCACCA 62309 || || | | || | | || || || |||| ||| || | || |||||| Sbjct 44552 TTGTAGAGTTCTTTGAGGTGTT---GAGGGATTGTGGGTACATTTTGGACAGACCCACCA 44496 Query 62310 TCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTC-TCTCGGTTAAAACTCT 62368 || |||| ||| | ||||||| ||||| ||||| ||| | | || ||| | | Sbjct 44495 TCGGCCATGATCATGTTCTTGACTTCATCGTTCCA-AATACCCATATCAACCAAATCACG 44437 Query 62369 AAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 62428 ||| | ||||| || | ||| |||| || || | || | || || |||| || Sbjct 44436 AAGTAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTT 44377 Query 62429 ACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 62488 | || || || || | ||||||| ||||| ||||||| || || || || || Sbjct 44376 AGAAGTGTAAGGCTCAAAACACTCATTGAAACCCAACATTTGAGAGGTAGAGGCGGTAGG 44317 Query 62489 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATG 62548 |||||| || | ||| | ||| | || |||| | || || || ||||| Sbjct 44316 CATAGGGGCTAACAAAAGTGAATTGCGAACGCCGTGCTTGGCTATCTTTTCCTTTAGTGA 44257 Query 62549 TTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTT 62608 |||| | ||||||| | ||| ||| ||||||| || || || Sbjct 44256 AGCCCAGTCCCAAAGAGAGGTGGGTGTCACATTCCACATGTCGTATTGTAAGATGCCCTT 44197 Query 62609 ----ACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTAC 62664 || || ||| || |||| || ||||| ||||| | ||| || || | || | Sbjct 44196 GGATACAGGACTAC----CTTCATAAGTTTCATAAGGTCCGTACTTTTCGGCCAATTCGC 44141 Query 62665 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTG 62724 | || || |||||| | | ||| || ||||||||||| | |||||| | || | Sbjct 44140 ATGAGGCTTCCAATGCAGCATGATAGATAGTTTCAAAGATTTGAATATTTAATTGTTTGG 44081 Query 62725 CTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACAC 62784 |||| || ||||| || ||| |||| || || | ||| ||||| ||||| |||| Sbjct 44080 CTTCAGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCTGCTAAACCTTGGACAC 44021 Query 62785 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 62844 | | ||||||||| | ||||||||| || || |||| ||||| | ||| ||||| | Sbjct 44020 CTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAGT 43961 Query 62845 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTG 62885 | ||||| ||||| || || | ||||| ||| || ||| Sbjct 43960 TGATATCAATAATCTTGTTCAAGTTTCTAGTAATCACCTTG 43920 >seq3792 Length=31585 Score = 168 bits (186), Expect = 8e-37 Identities = 298/432 (69%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 33306 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 33365 ||||| ||||| ||||| || || || |||| || ||| || | ||||| || |||||| Sbjct 6549 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCCATAAAGTCAAAC 6608 Query 33366 GGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACG 33425 ||||| || | | |||||||| | || || | || || | | ||| || || Sbjct 6609 GGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGACGATCAGCAACA 6668 Query 33426 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCC 33485 ||||| || ||| ||||| | ||||||| || || | | ||| || | || Sbjct 6669 AATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCAACAGGTAATGCA 6728 Query 33486 ACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCT 33545 |||| | ||||| |||||||| ||| || | |||||||| | || || | Sbjct 6729 TCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCCTTCACACGTTGT 6788 Query 33546 TCACTCGGTGGATGTAATAAA-TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACC 33604 | || ||| | | || || || |||||| | ||| || ||||| || ||||| Sbjct 6789 TGGCTAGGTTGTT-TACGAATGTGAGTAAACAAAAGACAAGCAAAATCCGTATGAAGACC 6847 Query 33605 CTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 33664 ||||| | || ||| ||||| ||| ||| || | |||||||| | ||||| || || Sbjct 6848 TTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCAAACCACGTTTCTT 6907 Query 33665 AAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||||||| || || || ||||| || |||||||| || ||||||||||||||||| || Sbjct 6908 AAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCTACTGCAGCAAAAGC 6967 Query 33725 AATAAGTCTCTC 33736 || ||| | ||| Sbjct 6968 AACAAGACGCTC 6979 Score = 136 bits (150), Expect = 5e-27 Identities = 207/294 (70%), Gaps = 3/294 (1%) Strand=Plus/Plus Query 33830 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 33889 |||||| | | |||||| | ||| ||||| ||||||||||| || |||| || || || Sbjct 7131 TTTTTCTTCATCATCTTTTATATAGGTATCAATCAAAAGACTGTATGTTTCAGAGTGGAT 7190 Query 33890 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 33949 |||||||| || ||||| || || |||||| |||| || | ||| | ||||| Sbjct 7191 ATTTTCAATCATGATTTGAAAGCCATAAAAACATTTAGCTTCAGGAATTTTGACTTCATC 7250 Query 33950 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAA 34009 |||||| || | ||||||||||| || || |||||| | ||||| || ||||| Sbjct 7251 ACAAAAATTTTGCACCAAATTTTCATTTACAATACCATCAGAGCTCGCAAAGAAAGCCAA 7310 Query 34010 TACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT---CCAATCATTGATATC 34066 ||| | |||||| || || | || | ||| || ||||||||| || Sbjct 7311 AACACGAGAAATAAAAAATCGCTCATTCTCAGTCATTTTGTTTTCCCAATCATTTTGGTC 7370 Query 34067 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120 | || || ||| | |||||| |||||||||| ||||| |||||||| ||||| Sbjct 7371 TCTACTTAAATCTATTTCTTCAGCTGTCCAAAAAGATGCTTCTGCCTTCTTATA 7424 >seq2503 Length=34491 Score = 149 bits (164), Expect = 8e-31 Identities = 565/884 (64%), Gaps = 61/884 (7%) Strand=Plus/Plus Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 ||| || ||| ||||| ||||| ||||| || || || |||| | || || | || Sbjct 6832 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 6891 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412 ||| || || || || || | |||||||||| || | ||| || | | || | Sbjct 6892 CATAAAGTCGAATGGGTTAGAGGCATTGTAAATCTTGTCAAAGCCAAGGGCGACCATGAG 6951 Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472 | ||| ||||||||||| || || ||||| | ||||| || || | | Sbjct 6952 ACGATCAGCGACGAATTCAATGTACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 7011 Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGT-TATAATAA 33531 || || ||||| | | || ||||||||||| ||||||| | | || ||||| Sbjct 7012 CACAGGCAGAGCATCCGACAGGAATTCTTGTTC----GATACCGACTGCTTCTACAATAA 7067 Query 33532 A-TC--TAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588 || | ||| || || ||| ||| | | | || | |||| | ||| || | Sbjct 7068 TGTCCTTGACGCGTTGTTGACTGGGTTGTTTGCGGATGTGGGTGAACAAGAGACAGGCAA 7127 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 ||||| ||| ||||| ||||| | || || ||||| ||| ||||| | ||||||| Sbjct 7128 AATCGGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCA 7187 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | | ||||| || || | |||||| ||||| |||||||| |||||||||||||| |||| Sbjct 7188 TCAAACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTT 7247 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG-TATCCACTTT 33767 | || || |||||||| | || | || || | || || ||| ||||| || Sbjct 7248 CGACAGCGGCAAAGGCGACCAGACGTTCAGCAAAGGATTCGTTG-GATGAGATCCATTTG 7306 Query 33768 TGAGCCCAATCGGCCTT---CTTTTT------------------------TAC------- 33793 ||||||||||||||| ||| | ||| Sbjct 7307 AAAGCCCAATCGGCCTTACGCTTAATACAGGGAACTAGAAGAGAGATGAATACGATATCG 7366 Query 33794 ACAAGGCATCGTTTCTA-----TGGCAT---TA----AAGAGATAGttt--ttttCATTA 33839 | || |||| || || ||| || || || ||| ||| ||||| | Sbjct 7367 AATGGGGATCGATTGTACTTACTGGTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGG 7426 Query 33840 CTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 33899 ||||||||| || ||||| ||||| ||||| || |||| | ||| ||||||||||| Sbjct 7427 TTATCTTTAATGTAGGTATCAATCAAGAGACTGTAAGTTTCAGCATGGATGTTTTCAATC 7486 Query 33900 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGT 33959 ||||| || || || ||||| | || |||| ||||| ||||| |||||| | Sbjct 7487 ATGATCTGGAAACCATAAAAACACTTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTT 7546 Query 33960 TCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTT 34019 | | | || ||||||||||| || ||||| | | ||||| || ||||| ||| | Sbjct 7547 TGTACCAAGTTTTCATTCACGATACCATCTGAGCCAGCAAAGAAGGCCAAGACACGCGAG 7606 Query 34020 ATAAAATATTTTTCG---TCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATA 34076 ||||| | |||| |||| || || | |||||||| ||| || | Sbjct 7607 ATAAAGAAACGTTCGTTCTCTGACATTTTGTTTTCCCAATCATGCTGATCCTTGCTCAAG 7666 Query 34077 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120 || | ||||| | |||||||| || || || ||||||||||| Sbjct 7667 TCAATCTCTTCTGCGGTCCAAAAGGAAGCTTCGGCCTTTTTATA 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629786731064880