Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3799 351 1e-91 seq3792 163 4e-35 seq2503 116 5e-21 >seq3799 Length=82858 Score = 351 bits (388), Expect = 1e-91 Identities = 819/1227 (67%), Gaps = 14/1227 (1%) Strand=Plus/Minus Query 65718 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 65777 |||||||| || || || | ||| |||| |||||||| || || |||| | Sbjct 43819 ATTACAAAAGTGGGTAAAGCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTT 43760 Query 65778 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 65837 | ||||| | || || || ||||| |||||||| || ||||| || || |||||||| Sbjct 43759 GTATATTCGACAATTTCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGG 43700 Query 65838 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 65897 || |||||| | ||||| |||||||| || || || || || |||| |||||| | || Sbjct 43699 TTGCTCTTTCTATTACAAGCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGT 43640 Query 65898 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT--TT 65955 | ||| | || || | ||| | | | ||||| ||| | | | | ||||| || Sbjct 43639 GCTTCCAAGATAGCATACCATAACTTTTGTGCCTTAATTGTC--TCTCTCGCTCTTCCTT 43582 Query 65956 CTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 66015 | | ||| || | ||| | | | ||||| || |||||||||| | ||| |||| Sbjct 43581 CGCGTTCATAGCTTTCATAAAGAGCTACAAACTCATCACCCCAAACATCTTGCAAACCAG 43522 Query 66016 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 66075 | ||||| ||||| | | ||||| || || | ||||| || |||| ||| |||| Sbjct 43521 GTGCTTCATTAGGACAAAAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAGA 43462 Query 66076 GATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 66135 |||| || | |||||| || ||| ||||| | || ||| ||| || || || | Sbjct 43461 GATCGGGTACCCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGT 43402 Query 66136 TCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCA 66195 ||||| | | ||| | || | | ||||| |||||| || || | || ||||| | Sbjct 43401 TCTTTCTTAAATCTAAAAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCGA 43342 Query 66196 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 66255 |||| || || ||||| || || ||||| | || | || |||||||| | || | Sbjct 43341 AGGCTCCCGGACGCTTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACAC 43282 Query 66256 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTG 66315 || ||| |||| | |||||| || |||||| || |||| |||||| |||| | | Sbjct 43281 GCAGCATGGGAAGCAAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGG 43222 Query 66316 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 66375 |||||||||| ||| ||||| || || ||||| |||| || ||| || || Sbjct 43221 CACGAATATTGTGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGA 43162 Query 66376 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 66435 |||||| || ||||||||||| || || ||| ||| ||||| | || | || || Sbjct 43161 TTTTTAATGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAG 43102 Query 66436 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 66495 ||||| || ||||| || || ||||| || || || ||| || || ||||| Sbjct 43101 AGGACATCTGAGGACGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAGA 43042 Query 66496 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATT 66554 |||| ||||| | | ||||| |||||||| || | ||| ||||| || | || || Sbjct 43041 ATTTCTCAGACATCAAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCG-TGGATA 42983 Query 66555 CCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 66612 || | ||||||||||| ||| |||| ||||| | || | ||||| || || | Sbjct 42982 CCAATAGCGACACGCATGATAAGATGT--TGAGGACGCTCGGCAGTCTTGCCGTCAATCT 42925 Query 66613 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 66670 | | | |||||| ||| | ||| || || |||||| ||||||| ||||| |||| Sbjct 42924 TGAGTAGATAGGATCGTTCGAGAGTCTTGAATCCAAAAAAGTTGTACTTGAAA--TCTCT 42867 Query 66671 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT 66730 || |||||||| | ||||| || || | | | ||| || | ||| | Sbjct 42866 GTCATAAATAATGGCTGAGTTCAGACGTTCTGCGTTGTCCTGAACAACTTTATAGGTTGT 42807 Query 66731 ACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTC 66790 || || || || |||||||| | || ||||| ||||||||| | | |||||| Sbjct 42806 GTCGGATATCATGGGGGAATGTTTGTTTGTCTTGGGATTTACATAGTTGTAGAGATCCTC 42747 Query 66791 CATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGC 66850 ||||||| | ||| | || |||||||| ||||||| ||| | || || | ||| Sbjct 42746 AATCACTTGAGAAAAGACCTTCTTTGTTTCCTTGTGTAAATTACTAATTGCAATACGAGC 42687 Query 66851 GGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 66910 || | | || || || ||||| | || || | || || |||| || || || Sbjct 42686 AGCCAAGAGTGCGTAGTCGGGATGACGAGTGGTCATATATGCAGCGGTTTCAGCAGCAAG 42627 Query 66911 AGTGTCCAATTCTACCGTTGTTACTCC 66937 |||| | ||| || || |||||||| Sbjct 42626 GTTGTCAAGTTCAACAGTAGTTACTCC 42600 Score = 167 bits (184), Expect = 3e-36 Identities = 531/822 (65%), Gaps = 21/822 (3%) Strand=Plus/Minus Query 64869 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 64928 ||||| | ||| ||||| ||||| || | || ||| || ||||| |||||||| Sbjct 44732 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAGCCATAAAAGTGCATACTT 44673 Query 64929 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 64988 || || || | | | || || || ||| ||| |||| | |||||||||||| ||| Sbjct 44672 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 44613 Query 64989 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 65048 |||| || | ||| || ||||| | | || || || | |||||||| | ||| Sbjct 44612 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGCTGAGAGATTTCCCAGACAGTC 44553 Query 65049 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGT------ATTCTGAATGGATCCACCA 65102 || || | | || | | || || || |||| ||| || | || |||||| Sbjct 44552 TTGTAGAGTTCTTTGAGGTGTT---GAGGGATTGTGGGTACATTTTGGACAGACCCACCA 44496 Query 65103 TCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTC-TCTCGGTTAAAACTCT 65161 || ||||| ||| | ||||||| ||||| ||||| ||| | | || ||| | | Sbjct 44495 TCGGCCATGATCATGTTCTTGACTTCATCGTTCCA-AATACCCATATCAACCAAATCACG 44437 Query 65162 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 65221 ||| | || || || | |||| |||| || || | || | || || |||| || Sbjct 44436 AAGTAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTT 44377 Query 65222 ACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 65281 | || || || || | | ||||||| ||||| ||||||| || || || || || Sbjct 44376 AGAAGTGTAAGGCTCAAAACACTCATTGAAACCCAACATTTGAGAGGTAGAGGCGGTAGG 44317 Query 65282 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGG 65341 |||||| || | ||| | ||| | || |||| | || || || ||||| | Sbjct 44316 CATAGGGGCTAACAAAAGTGAATTGCGAACGCCGTGCTTGGCTATCTTTTCCTTTAGTGA 44257 Query 65342 TTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACC--- 65398 |||| | ||||||| | ||| || ||||| || || Sbjct 44256 AGCCCAGTCCCAAAGAGAGGTGGGTGTCACATTCCACATGTCGTATTGTAAGATGCCCTT 44197 Query 65399 -GTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 65457 | ||| || || ||| |||| || || || ||||| | ||| || || | ||| | Sbjct 44196 GGATACAGGACTA----CCTTCATAAGTTTCATAAGGTCCGTACTTTTCGGCCAATTCGC 44141 Query 65458 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTG 65517 | || || |||||| | | ||| || ||||| ||||| | |||||| | || | Sbjct 44140 ATGAGGCTTCCAATGCAGCATGATAGATAGTTTCAAAGATTTGAATATTTAATTGTTTGG 44081 Query 65518 CTTCCAGGCTA-TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 65576 ||| |||| | ||||| || ||| |||| || || | ||||||||| ||||| ||| Sbjct 44080 CTT-CAGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCTGCTAAACCTTGGACA 44022 Query 65577 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 65636 || | ||||||||| | ||||||||| || || |||| ||||| | ||| ||||| Sbjct 44021 CCTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAG 43962 Query 65637 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTG 65678 || ||||| ||||| || || | ||||| ||| || ||| Sbjct 43961 TTGATATCAATAATCTTGTTCAAGTTTCTAGTAATCACCTTG 43920 >seq3792 Length=31585 Score = 163 bits (180), Expect = 4e-35 Identities = 297/432 (69%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 35882 ACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAAT 35941 ||||| ||||| ||||| || || || |||| | ||| || | ||||| || || || Sbjct 6549 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCCATAAAGTCAAAC 6608 Query 35942 GGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACA 36001 ||||| | | |||||||||| | || || | || || | | ||| || ||| Sbjct 6609 GGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGACGATCAGCAACA 6668 Query 36002 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 36061 ||||| || ||| ||||| | ||||||| || || | | ||| || | || Sbjct 6669 AATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCAACAGGTAATGCA 6728 Query 36062 ACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCT 36121 |||| | ||||| ||||||||| || || || |||||||| | || || | Sbjct 6729 TCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCCTTCACACGTTGT 6788 Query 36122 TCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACC 36180 | || ||| | | || | | || |||||| | ||| || ||||| || ||||| Sbjct 6789 TGGCTAGGTTGTTTACGA-ATGTGAGTAAACAAAAGACAAGCAAAATCCGTATGAAGACC 6847 Query 36181 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 36240 ||||| | || ||| ||||| || ||| || | |||||||| | ||||| || || Sbjct 6848 TTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCAAACCACGTTTCTT 6907 Query 36241 AAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||||||| || || |||||||| ||||||||||| || ||||||||||| ||||| || Sbjct 6908 AAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCTACTGCAGCAAAAGC 6967 Query 36301 AATAAGTCTCTC 36312 || ||| | ||| Sbjct 6968 AACAAGACGCTC 6979 Score = 147 bits (162), Expect = 3e-30 Identities = 226/322 (70%), Gaps = 3/322 (1%) Strand=Plus/Plus Query 36378 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 36437 |||| || |||||| || || | |||||| | | |||||| | ||| ||||||| Sbjct 7103 TTGTATCAATAGCAGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGTATCAA 7162 Query 36438 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 36497 |||||||||| || |||| || || || |||||||| |||||||| || || |||| Sbjct 7163 TCAAAAGACTGTATGTTTCAGAGTGGATATTTTCAATCATGATTTGAAAGCCATAAAAAC 7222 Query 36498 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 36557 || |||| || | ||| | ||||| |||||| || | ||||||||||| || | Sbjct 7223 ATTTAGCTTCAGGAATTTTGACTTCATCACAAAAATTTTGCACCAAATTTTCATTTACAA 7282 Query 36558 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTG 36617 | || ||| | ||||| || ||||| ||| | |||||| || || || | Sbjct 7283 TACCATCAGAGCTCGCAAAGAAAGCCAAAACACGAGAAATAAAAAATCGCTCATTCTCAG 7342 Query 36618 TTAGTTTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 36674 | | ||| || ||||||||| ||| || || ||| | |||||| ||||||||| Sbjct 7343 TCATTTTGTTTTCCCAATCATTTTGGTCTCTACTTAAATCTATTTCTTCAGCTGTCCAAA 7402 Query 36675 ATGATGCCTCTGCCTTTTTATA 36696 | ||||| |||||||| ||||| Sbjct 7403 AAGATGCTTCTGCCTTCTTATA 7424 >seq2503 Length=34491 Score = 116 bits (128), Expect = 5e-21 Identities = 218/320 (68%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439 || || |||||| |||||| | ||||| | ||||||||| || ||||||||| Sbjct 7391 GTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTTATCTTTAATGTAGGTATCAATC 7450 Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 36499 || ||||| || |||| | ||| ||||||||||| || || || || || ||||| Sbjct 7451 AAGAGACTGTAAGTTTCAGCATGGATGTTTTCAATCATGATCTGGAAACCATAAAAACAC 7510 Query 36500 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 36559 | || |||| ||||| ||||| |||||| || | | || ||||||||||| || Sbjct 7511 TTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTGTACCAAGTTTTCATTCACGATA 7570 Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619 || || | | ||||| || ||||| ||| | ||||| | |||||| || Sbjct 7571 CCATCTGAGCCAGCAAAGAAGGCCAAGACACGCGAGATAAAGAAACGTTCGTTCTCTGAC 7630 Query 36620 AGTTTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 36676 | ||| || |||||||| ||| || | || | ||||| | |||||||| Sbjct 7631 ATTTTGTTTTCCCAATCATGCTGATCCTTGCTCAAGTCAATCTCTTCTGCGGTCCAAAAG 7690 Query 36677 GATGCCTCTGCCTTTTTATA 36696 || || || ||||||||||| Sbjct 7691 GAAGCTTCGGCCTTTTTATA 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658140541305640