Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2503 104 2e-17 seq3792 102 6e-17 >seq2503 Length=34491 Score = 104 bits (114), Expect = 2e-17 Identities = 134/184 (73%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||||| | |||||||| ||||| |||||| || | ||||| || ||||| || |||| Sbjct 7273 ACGTCTGGTCGCCTTTGCCGCTGTCGAAGGCATCTTCTTTTCCGGTTCATTCGCCTCCAT 7214 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 || ||| | ||||||||| | ||||| || ||| |||| || || ||||| | Sbjct 7213 CTTTTGGTTAAAGAAACGTGGTTTGATGCCCGGTTTGACGTTCAGTAATGAATTGATCTG 7154 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAAT-GGCAAACA 22918 |||||||||||||| ||| || ||||| ||| | |||| | || || ||||||| Sbjct 7153 TCGTGACGAAGGTCTTCACACCGATTTTGCCTGTCTCTTGTTCACCCACATCCGCAAACA 7094 Query 22919 AACC 22922 | || Sbjct 7093 ACCC 7090 >seq3792 Length=31585 Score = 102 bits (112), Expect = 6e-17 Identities = 295/446 (66%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| | || ||||| || || ||||| | | |||||||| |||||||| | || Sbjct 6976 CGTCTTGTTGCTTTTGCTGCAGTAGAAGGTATATTCTTTTCTGGCTCATTTGCCTCTATC 6917 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 || ||||| ||||||||| | ||||| || ||| | ||| || || |||||| | Sbjct 6916 TTTTGGCTTAAGAAACGTGGTTTGATGCCCGGTTTGACTTTTAGTAATGAATTGATTTGT 6857 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA-AATGGCAAACAA 22919 |||||||||||||| || || ||||||||| | |||||| || | | | |||| | Sbjct 6856 CGTGACGAAGGTCTTCATACGGATTTTGCTTGTCTTTTGTTTACTCACATTCGTAAAC-A 6798 Query 22920 ACCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTT 22979 ||| | || | || | | || ||| || || || | ||||| || || Sbjct 6797 ACCTAGCCAACAACGTGTGAAGGATATTATAATGGAAGCTGTAGGTATTGAACAGGAATT 6738 Query 22980 CTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT-ATGAGACTGT 23038 ||| || ||| || | | ||||||||||| | || | ||| | | | Sbjct 6737 CTTAACTGATGCATTACCTGTTGCATTGATTGGTATGAATTCT-ACTTTGATGTGTCAAT 6679 Query 23039 ACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACG 23098 |||| | |||||||| ||||| || | | ||| || || | | || || |||| | Sbjct 6678 ACATTGAATTTGTTGCTGATCGTCTTATGGTTGCTCTTGGGTTCGATAAAATTTATATGG 6619 Query 23099 TTGCCAATCCATTTGATTTCATGGATAACATTAGCATTG-AAGGTAAAACAAACTTCTTT 23157 | ||||| ||||| || ||||| | ||| || || |||| || || ||||| ||| Sbjct 6618 CAACGAATCCGTTTGACTTTATGGACATGATT-TCACTGCAAGGGAAGACCAACTTTTTT 6560 Query 23158 GAACGCCGTGTGAGTGAATATCAGCG 23183 ||| ||||| ||| |||||||| Sbjct 6559 GAAAAGCGTGTTTCTGATTATCAGCG 6534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356216576598163