Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3799 367 2e-96 seq3792 181 2e-40 seq2503 125 1e-23 >seq3799 Length=82858 Score = 367 bits (406), Expect = 2e-96 Identities = 824/1228 (67%), Gaps = 16/1228 (1%) Strand=Plus/Minus Query 79597 ATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 79656 |||||||| || || |||| ||| |||| |||||||| || || |||| | Sbjct 43819 ATTACAAAAGTGGGTAAAGCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTT 43760 Query 79657 GCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGA 79716 | ||||| | ||||| || || ||||||||||| |||||||| || || |||||||| Sbjct 43759 GTATATTCGACAATTTCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGG 43700 Query 79717 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGA 79776 || |||||| | ||||| |||||||| || || || ||||| |||| |||||| | || Sbjct 43699 TTGCTCTTTCTATTACAAGCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGT 43640 Query 79777 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACT-TGTATCTCTT--T 79833 | ||| | || || | ||| | | | ||||| ||| | || | | ||||| | Sbjct 43639 GCTTCCAAGATAGCATACCATAACTTTTGTGCCTTAATTGT---CTCTCTCGCTCTTCCT 43583 Query 79834 TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCA 79893 || | ||| || | ||| | | | ||||| || ||||||||||| | || ||| Sbjct 43582 TCGCGTTCATAGCTTTCATAAAGAGCTACAAACTCATCACCCCAAACATCTTGCAAACCA 43523 Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAG 79953 || ||| | |||||| | | ||||| || ||| | ||||| || |||| ||| ||| Sbjct 43522 GGTGCTTCATTAGGACAAAAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAG 43463 Query 79954 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 80013 ||||| || | |||||| || ||| | ||| | || ||| || || || || Sbjct 43462 AGATCGGGTACCCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAG 43403 Query 80014 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 80073 |||||| | | ||| | || | | ||||| | |||||| || || | || ||||| Sbjct 43402 TTCTTTCTTAAATCTAAAAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCG 43343 Query 80074 ATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 80133 | ||||||| || ||||| || || ||||| | || | || |||||||| | || Sbjct 43342 AAGGCTCCCGGACGCTTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACA 43283 Query 80134 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTG 80193 | || ||| |||| | |||||| || |||||| || |||| |||||| |||| || Sbjct 43282 CGCAGCATGGGAAGCAAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTG 43223 Query 80194 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 80253 ||||||||||| ||| ||||| || || ||||| |||| || ||| || || Sbjct 43222 GCACGAATATTGTGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAG 43163 Query 80254 CGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAG 80313 |||||| || ||||||||||| || || ||| || ||||| | || | || || Sbjct 43162 ATTTTTAATGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAA 43103 Query 80314 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 80373 ||||| || ||||| || || ||||| || || || ||| || || ||||| Sbjct 43102 GAGGACATCTGAGGACGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAG 43043 Query 80374 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGAAT 80432 |||| ||||||| | ||||| |||||||| || | || ||||| || | || || Sbjct 43042 AATTTCTCAGACATCAAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCG-TGGAT 42984 Query 80433 TCCTACCGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATT 80490 || | ||||||||||| ||| |||| ||||| | || | ||||| | || Sbjct 42983 ACCAATAGCGACACGCATGATAAGATGT--TGAGGACGCTCGGCAGTCTTGCCGTCAATC 42926 Query 80491 TTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTC 80548 || | | || ||| ||| | ||| || || |||||| ||||||| ||||| |||| Sbjct 42925 TTGAGTAGATAGGATCGTTCGAGAGTCTTGAATCCAAAAAAGTTGTACTTGAAA--TCTC 42868 Query 80549 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGA 80608 || |||||||| | ||||| || || | | | ||| || | ||| Sbjct 42867 TGTCATAAATAATGGCTGAGTTCAGACGTTCTGCGTTGTCCTGAACAACTTTATAGGTTG 42808 Query 80609 TACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 80668 | || || || || |||||||| | || ||||| ||||||||| | | ||||| Sbjct 42807 TGTCGGATATCATGGGGGAATGTTTGTTTGTCTTGGGATTTACATAGTTGTAGAGATCCT 42748 Query 80669 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 80728 | ||||||| | ||| | || |||||||||||||||| ||| | || || | | Sbjct 42747 CAATCACTTGAGAAAAGACCTTCTTTGTTTCCTTGTGTAAATTACTAATTGCAATACGAG 42688 Query 80729 CGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCA 80788 | || || | || || || ||||| | || || | || || |||| || || | Sbjct 42687 CAGCCAAGAGTGCGTAGTCGGGATGACGAGTGGTCATATATGCAGCGGTTTCAGCAGCAA 42628 Query 80789 GAGTGTCCAATTCTACCGTTGTTACTCC 80816 | |||| | ||| || || |||||||| Sbjct 42627 GGTTGTCAAGTTCAACAGTAGTTACTCC 42600 Score = 188 bits (208), Expect = 1e-42 Identities = 527/798 (66%), Gaps = 17/798 (2%) Strand=Plus/Minus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 ||||| | ||| ||||| ||||| || | || ||| || || || |||||||| Sbjct 44732 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAGCCATAAAAGTGCATACTT 44673 Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867 || || || | | | || || || ||| ||| |||| | |||||||||||| ||| Sbjct 44672 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 44613 Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927 |||| || | ||| || ||||| | | || || || | |||||||| | ||| Sbjct 44612 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGCTGAGAGATTTCCCAGACAGTC 44553 Query 78928 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGT------ATTCTGAATGGATCCACCA 78981 || || | | || | | || || || |||| ||| || | || |||||| Sbjct 44552 TTGTAGAGTTCTTTGAGGTGTT---GAGGGATTGTGGGTACATTTTGGACAGACCCACCA 44496 Query 78982 TCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTC-TCTCGGTTAAAACTCT 79040 || ||||| ||| | ||||||| || || ||||| ||| | | || ||| | | Sbjct 44495 TCGGCCATGATCATGTTCTTGACTTCATCGTTCCA-AATACCCATATCAACCAAATCACG 44437 Query 79041 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 79100 ||| | || || || | |||| |||| || || | || | || || |||| || Sbjct 44436 AAGTAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTT 44377 Query 79101 ACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGG 79160 | || || || || | | ||||| ||||| ||||||| || || || || || Sbjct 44376 AGAAGTGTAAGGCTCAAAACACTCATTGAAACCCAACATTTGAGAGGTAGAGGCGGTAGG 44317 Query 79161 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAG 79219 |||||| || | ||| | ||| | || |||| | || || || || ||||| | Sbjct 44316 CATAGGGGCTAACAAAAGTGAATTGCGAACGCCGTGCTTGGCT-ATCTTTTCCTTTAGTG 44258 Query 79220 ATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGT 79279 | |||| ||||||||| | || |||||||| | || ||||||| || || | Sbjct 44257 AAGCCCAGTCCCAAAGAGAGGTGGGTGTCACATTCCACATGTCGTATTGTAAGATGCCCT 44198 Query 79280 TAC-TAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAA 79338 | || | | | ||| || |||||||||||||| | ||||||||| ||||| || Sbjct 44197 TGGATACAGGACTA-CCTTCATAAGTTTCATAAGGTCCGTACTTTTCGGCCAATTCGCAT 44139 Query 79339 CTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCT 79398 || || ||||| | | ||| || ||||| || || | |||| | | || ||| Sbjct 44138 GAGGCTTCCAATGCAGCATGATAGATAGTTTCAAAGATTTGAATATTTAATTGTTTGGCT 44079 Query 79399 TCTAGGCTA-TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACC 79457 || ||| | ||||| || ||| |||| || || | ||||||||| ||||| ||||| Sbjct 44078 TC-AGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCTGCTAAACCTTGGACACC 44020 Query 79458 AATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATT 79517 | ||||||||| | ||||||||| || || |||| ||||| | ||| ||||| || Sbjct 44019 TAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAGTT 43960 Query 79518 AATATCTATAATTTTATT 79535 ||||| ||||| || || Sbjct 43959 GATATCAATAATCTTGTT 43942 >seq3792 Length=31585 Score = 181 bits (200), Expect = 2e-40 Identities = 301/433 (70%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 49684 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 49743 ||||| ||||| ||||| || || || |||| || ||| || | ||||| || |||||| Sbjct 6549 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCCATAAAGTCAAAC 6608 Query 49744 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACA 49803 ||||| || | |||||||||| | || || | || || | | ||| || ||| Sbjct 6609 GGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGACGATCAGCAACA 6668 Query 49804 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 49863 ||||| || ||| ||||| | ||||||| || || | | ||| || | || Sbjct 6669 AATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCAACAGGTAATGCA 6728 Query 49864 GCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCT 49923 |||| | ||||| |||||||| ||| || || |||||||| | || || | Sbjct 6729 TCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCCTTCACACGTTGT 6788 Query 49924 TCACTCGGTGGATGCAATAAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGAC 49981 | || ||| | | | ||||| |||||| | ||| || ||||| || |||| Sbjct 6789 TGGCTAGGTTGTTT--ACGAATGTGAGTAAACAAAAGACAAGCAAAATCCGTATGAAGAC 6846 Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 | ||||| | || ||| | ||| || ||| || | |||||||| | ||||| || | Sbjct 6847 CTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCAAACCACGTTTCT 6906 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 |||||||||| || || |||||||| ||||||||||| || ||||||||||| ||||| | Sbjct 6907 TAAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCTACTGCAGCAAAAG 6966 Query 50102 CAACAAGTCTCTC 50114 ||||||| | ||| Sbjct 6967 CAACAAGACGCTC 6979 Score = 136 bits (150), Expect = 6e-27 Identities = 207/294 (70%), Gaps = 3/294 (1%) Strand=Plus/Plus Query 50208 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 50267 |||||| | | |||||| | ||| ||||| ||||||||||| || |||| || || || Sbjct 7131 TTTTTCTTCATCATCTTTTATATAGGTATCAATCAAAAGACTGTATGTTTCAGAGTGGAT 7190 Query 50268 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 50327 |||||||| || ||||| || || |||||| |||| || | ||| | ||||| Sbjct 7191 ATTTTCAATCATGATTTGAAAGCCATAAAAACATTTAGCTTCAGGAATTTTGACTTCATC 7250 Query 50328 ACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 50387 |||||| || | ||||||||||| || || || ||| | ||||| || ||||| Sbjct 7251 ACAAAAATTTTGCACCAAATTTTCATTTACAATACCATCAGAGCTCGCAAAGAAAGCCAA 7310 Query 50388 TACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT---CCAATCATTGATATC 50444 ||| | |||||| | || || || | ||| || ||||||||| || Sbjct 7311 AACACGAGAAATAAAAAATCGCTCATTCTCAGTCATTTTGTTTTCCCAATCATTTTGGTC 7370 Query 50445 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 50498 | || || ||||| |||||| |||||||||| ||||| |||||||| ||||| Sbjct 7371 TCTACTTAAATCTATTTCTTCAGCTGTCCAAAAAGATGCTTCTGCCTTCTTATA 7424 >seq2503 Length=34491 Score = 125 bits (138), Expect = 1e-23 Identities = 555/880 (63%), Gaps = 53/880 (6%) Strand=Plus/Plus Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730 ||| || ||| ||||| ||||| ||||| || || || |||| | || || | || Sbjct 6832 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 6891 Query 49731 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 49790 ||| || || || || || | |||| ||||| || | ||| || | | || | Sbjct 6892 CATAAAGTCGAATGGGTTAGAGGCATTGTAAATCTTGTCAAAGCCAAGGGCGACCATGAG 6951 Query 49791 TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 49850 | ||| ||||| ||||| || || ||||| | ||||| || || | | Sbjct 6952 ACGATCAGCGACGAATTCAATGTACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 7011 Query 49851 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 49910 || || ||||| | | || ||||||||||| || || || ||| ||||| Sbjct 7012 CACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACTGCTTCTACAATAATGTC 7071 Query 49911 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 49970 | ||| || || ||| ||| | | | || | |||| | ||| || ||||| Sbjct 7072 CTTGACGCGTTGTTGACTGGGTTGTTTGCGGATGTGGGTGAACAAGAGACAGGCAAAATC 7131 Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030 | ||| ||||| ||||| | || || | ||| || ||||| | |||||||| | Sbjct 7132 GGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCATCAA 7191 Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 ||||| || || | |||||| ||||| || ||||| || ||||||||||| ||||| || Sbjct 7192 ACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTTCGAC 7251 Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATG-TATCCACTTTTGAG 50149 ||||||||||| || || | || || | || || ||| ||||| || || Sbjct 7252 AGCGGCAAAGGCGACCAGACGTTCAGCAAAGGATTCGTTG-GATGAGATCCATTTGAAAG 7310 Query 50150 CCCAATCGGCCTT---CTTTTT------------------------TAC-------ACAA 50175 ||||||||||||| ||| | ||| | Sbjct 7311 CCCAATCGGCCTTACGCTTAATACAGGGAACTAGAAGAGAGATGAATACGATATCGAATG 7370 Query 50176 GGCATCGTTTCTA-----TGGCAT---TA----AAGAGATAGttt--ttttCATTACTAT 50221 || |||| || || ||| || || || ||| ||| ||||| | ||| Sbjct 7371 GGGATCGATTGTACTTACTGGTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTTAT 7430 Query 50222 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 50281 |||||| || ||||| ||||| ||||| || |||| | ||| ||||||||||| | Sbjct 7431 CTTTAATGTAGGTATCAATCAAGAGACTGTAAGTTTCAGCATGGATGTTTTCAATCATGA 7490 Query 50282 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAG 50341 |||| || || || ||||| | || |||| ||||| ||||| |||||| || Sbjct 7491 TCTGGAAACCATAAAAACACTTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTGTA 7550 Query 50342 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 50401 | || ||||||||||| || || || | | ||||| || ||||| ||| | |||| Sbjct 7551 CCAAGTTTTCATTCACGATACCATCTGAGCCAGCAAAGAAGGCCAAGACACGCGAGATAA 7610 Query 50402 AATGTTTTTCGTTGGGTGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATCTA 50458 | |||||| || | ||| || |||||||| ||| || | || | Sbjct 7611 AGAAACGTTCGTTCTCTGACATTTTGTTTTCCCAATCATGCTGATCCTTGCTCAAGTCAA 7670 Query 50459 CTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 50498 ||||| | |||||||| || || || ||||||||||| Sbjct 7671 TCTCTTCTGCGGTCCAAAAGGAAGCTTCGGCCTTTTTATA 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718233595850440