Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3799 367 2e-96 seq3792 178 2e-39 seq2503 129 8e-25 >seq3799 Length=82858 Score = 367 bits (406), Expect = 2e-96 Identities = 752/1109 (68%), Gaps = 18/1109 (2%) Strand=Plus/Minus Query 71695 AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATT 71754 || || | ||| |||| |||||||| || || |||| | | ||||| | |||| Sbjct 43804 AAAGCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTTGTATATTCGACAATT 43745 Query 71755 TCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 71814 || || ||||| |||||||| || ||||| || || |||||||| || |||||| | ||| Sbjct 43744 TCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGGTTGCTCTTTCTATTA 43685 Query 71815 CACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 71874 || |||||||| || || |||||||| |||| |||||| | || | ||| | || || Sbjct 43684 CAAGCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGTGCTTCCAAGATAGCA 43625 Query 71875 TTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTATCTCTT--TTCTCTTTCGTATTGT 71931 | ||| | | | ||||| ||| | | ||| | ||||| ||| | ||| || | Sbjct 43624 TACCATAACTTTTGTGCCTTAATTGTCTCTCTCG---CTCTTCCTTCGCGTTCATAGCTT 43568 Query 71932 GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGA 71991 ||| | | | ||||| || |||||| ||| | || ||||| |||||| ||| Sbjct 43567 TCATAAAGAGCTACAAACTCATCACCCCAAACATCTTGCAAACCAGGTGCTTCATTAGGA 43508 Query 71992 CACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAA 72051 || | | ||||| || ||| | || || || |||| ||| |||||||| || | |||| Sbjct 43507 CAAAAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAGAGATCGGGTACCCAA 43448 Query 72052 AGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCG 72111 || || ||| | ||| | || ||| || || || || |||||| | | ||| Sbjct 43447 AGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGTTCTTTCTTAAATCT 43388 Query 72112 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGT 72171 | || | | ||||| | |||||| || || | || ||||| | ||||||| || Sbjct 43387 AAAAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCGAAGGCTCCCGGACGC 43328 Query 72172 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 72231 ||||| || || ||||| | || | || |||||||| | || | || ||| |||| Sbjct 43327 TTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACACGCAGCATGGGAAGC 43268 Query 72232 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTA 72291 | |||||| || |||||| || |||| |||||| |||| |||||||||||||| | Sbjct 43267 AAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGGCACGAATATTGTGA 43208 Query 72292 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 72351 || ||||| || || ||||| |||| || ||| || || |||||| || ||| Sbjct 43207 ATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGATTTTTAATGTTTCA 43148 Query 72352 TAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 72411 |||||||| || || ||| ||| ||||| | || | || || ||||| || || Sbjct 43147 TAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAGGACATCTGAGGA 43088 Query 72412 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGT 72471 ||| || || ||||| || || || ||| || || ||||| |||| ||||||| Sbjct 43087 CGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAGAATTTCTCAGACATC 43028 Query 72472 AGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGCGACACG 72530 | ||||| |||||||| || | || ||||| || | || || || | |||||||| Sbjct 43027 AAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCG-TGGATACCAATAGCGACACG 42969 Query 72531 CATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTT 72590 ||| | | ||| ||||| | || | ||||| | || || | | |||||| Sbjct 42968 CATGATAAGATGTTGAGGACGCTCGGCAGTCTTGCCGTCAATCTTGAGTAGATAGGATCG 42909 Query 72591 TTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACC 72648 ||| | ||| || || |||||| ||||||| ||||| |||| || |||||||| | Sbjct 42908 TTCGAGAGTCTTGAATCCAAAAAAGTTGTACTTGAAA--TCTCTGTCATAAATAATGGCT 42851 Query 72649 GAATTGA---GTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATC 72705 || || | ||| | || | | |||| ||| ||| | || || || Sbjct 42850 GAGTTCAGACGTTCTGCGTTGTCCTGAACAACTTTAT---AGGTTGTGTCGGATATCATG 42794 Query 72706 GGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA 72765 || |||||||| | || ||||| ||||||||| | | |||||| ||||||| | | Sbjct 42793 GGGGAATGTTTGTTTGTCTTGGGATTTACATAGTTGTAGAGATCCTCAATCACTTGAGAA 42734 Query 72766 AATAGtttttttGTTTCCTTGTGTAGATT 72794 || | || |||||||||||||||| ||| Sbjct 42733 AAGACCTTCTTTGTTTCCTTGTGTAAATT 42705 >seq3792 Length=31585 Score = 178 bits (196), Expect = 2e-39 Identities = 300/432 (69%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 41789 ACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 41848 ||||| ||||| ||||| || ||||| |||| || ||| || | ||||| || |||||| Sbjct 6549 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCCATAAAGTCAAAC 6608 Query 41849 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATG 41908 ||||| || | |||||||||| | || || | || || | | ||| || | Sbjct 6609 GGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGACGATCAGCAACA 6668 Query 41909 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 41968 ||||| || ||| ||||| | ||||||| || || | | ||| || | || Sbjct 6669 AATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCAACAGGTAATGCA 6728 Query 41969 ACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCT 42028 |||| | ||||| ||||||||| || || || |||||||| | || || | Sbjct 6729 TCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCCTTCACACGTTGT 6788 Query 42029 TCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACC 42087 | || ||| | | || | | || |||||| | ||| || ||||| || ||||| Sbjct 6789 TGGCTAGGTTGTTTACGA-ATGTGAGTAAACAAAAGACAAGCAAAATCCGTATGAAGACC 6847 Query 42088 CTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 42147 || || | || ||| ||||| || ||| || | |||||||| | ||||| || || Sbjct 6848 TTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCAAACCACGTTTCTT 6907 Query 42148 AAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 ||||||||| ||||| |||||||| ||||||||||| || ||||||||||| ||||| || Sbjct 6908 AAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCTACTGCAGCAAAAGC 6967 Query 42208 AATAAGTCTCTC 42219 || ||| | ||| Sbjct 6968 AACAAGACGCTC 6979 Score = 127 bits (140), Expect = 3e-24 Identities = 205/294 (70%), Gaps = 3/294 (1%) Strand=Plus/Plus Query 42313 tttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAAT 42372 |||||| | | |||||| | ||| ||||| ||||||||||| || |||| || || || Sbjct 7131 TTTTTCTTCATCATCTTTTATATAGGTATCAATCAAAAGACTGTATGTTTCAGAGTGGAT 7190 Query 42373 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGT 42432 |||||||| || ||||| || || |||||| | || || | || | ||||| Sbjct 7191 ATTTTCAATCATGATTTGAAAGCCATAAAAACATTTAGCTTCAGGAATTTTGACTTCATC 7250 Query 42433 ACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 42492 |||||| || | |||||||| || || || || ||| | ||||| || ||||| Sbjct 7251 ACAAAAATTTTGCACCAAATTTTCATTTACAATACCATCAGAGCTCGCAAAGAAAGCCAA 7310 Query 42493 TACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATT---CCAATCATTGATATC 42549 ||| | |||||| || || | | || | ||| || ||||||||| || Sbjct 7311 AACACGAGAAATAAAAAATCGCTCATTCTCAGTCATTTTGTTTTCCCAATCATTTTGGTC 7370 Query 42550 TTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATA 42603 | || || ||||| |||||| | |||||||| |||||||||||||| ||||| Sbjct 7371 TCTACTTAAATCTATTTCTTCAGCTGTCCAAAAAGATGCTTCTGCCTTCTTATA 7424 >seq2503 Length=34491 Score = 129 bits (142), Expect = 8e-25 Identities = 558/881 (63%), Gaps = 55/881 (6%) Strand=Plus/Plus Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835 ||| || ||| ||||| ||||| ||||| || ||||| |||| | || || | || Sbjct 6832 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 6891 Query 41836 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 41895 ||| || || || || || | |||| ||||| || | ||| || | | || | Sbjct 6892 CATAAAGTCGAATGGGTTAGAGGCATTGTAAATCTTGTCAAAGCCAAGGGCGACCATGAG 6951 Query 41896 TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 41955 | ||| |||| |||||| || || ||||| | ||||| || || | | Sbjct 6952 ACGATCAGCGACGAATTCAATGTACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 7011 Query 41956 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 42015 || || ||||| | | || ||||||||||| ||| ||| || ||| ||||| | Sbjct 7012 CACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACTGCTTCTACAATAAT-GT 7070 Query 42016 TCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 ||| || || || ||| ||| | | | || | |||| | ||| || |||| Sbjct 7071 CCTTGACGCGTTGTTGACTGGGTTGTTTGCGGATGTGGGTGAACAAGAGACAGGCAAAAT 7130 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 || ||| ||||| || || | || || ||||| || ||||| | |||||||| | Sbjct 7131 CGGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCATCA 7190 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 ||||| || || | |||||| || || || ||||| || ||||||||||| ||||| | Sbjct 7191 AACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTTCGA 7250 Query 42195 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATG-TATCCACTTTTGA 42253 | || |||||||| | || | || || | | || ||| ||||| || | Sbjct 7251 CAGCGGCAAAGGCGACCAGACGTTCAGCAAAGGATTCGTTG-GATGAGATCCATTTGAAA 7309 Query 42254 GCCCAATCGGCCTT---CTTTTT------------------------TAC-------ACA 42279 |||||||||||||| ||| | ||| | Sbjct 7310 GCCCAATCGGCCTTACGCTTAATACAGGGAACTAGAAGAGAGATGAATACGATATCGAAT 7369 Query 42280 AGGCATCGTTTCTA-----TGGCAT---TA----AAGAGATAGttt--ttttCATTACTA 42325 || |||| || || ||| || || || ||| ||| ||||| | || Sbjct 7370 GGGGATCGATTGTACTTACTGGTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTTA 7429 Query 42326 TCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCC 42385 ||||||| || ||||| ||||| ||||| || |||| | ||| ||||||||||| Sbjct 7430 TCTTTAATGTAGGTATCAATCAAGAGACTGTAAGTTTCAGCATGGATGTTTTCAATCATG 7489 Query 42386 ATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCA 42445 ||||| || || || ||||| |||| |||| || || ||||| |||||| || Sbjct 7490 ATCTGGAAACCATAAAAACACTTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTGT 7549 Query 42446 GCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 42505 | || ||||| ||||| || || || | | ||||| || ||||| ||| | ||| Sbjct 7550 ACCAAGTTTTCATTCACGATACCATCTGAGCCAGCAAAGAAGGCCAAGACACGCGAGATA 7609 Query 42506 AAATATTTTTCGTCCGGTGTTAATTTATT---CCAATCATTGATATCTTTAGATATATCT 42562 || | ||||| | || | ||| || |||||||| ||| || | || Sbjct 7610 AAGAAACGTTCGTTCTCTGACATTTTGTTTTCCCAATCATGCTGATCCTTGCTCAAGTCA 7669 Query 42563 ACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATA 42603 | |||||| | |||||||| || ||||| ||||||||||| Sbjct 7670 ATCTCTTCTGCGGTCCAAAAGGAAGCTTCGGCCTTTTTATA 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671106305789960