Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3789 134 1e-26 seq2543 127 2e-24 seq175 127 2e-24 seq3880 116 3e-21 seq2672 105 6e-18 seq2895 89.7 5e-13 >seq3789 Length=135228 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||||||||| | ||| || || |||| ||| | ||| || Sbjct 104614 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCA 104555 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| || | ||| ||||| |||||||||||||| ||||| | Sbjct 104554 AGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGG 104495 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 |||||| |||||| | | | | |||| | ||||| || | ||||| || || Sbjct 104494 ATTTTTTGCTTGACATTCTCAATACTATCAGAGGATTCGACCTCCAAAGTGATTGTCTTG 104435 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| ||||| |||||||| ||||| Sbjct 104434 CCAGTAAGTGTTTTAACAAAGATTTGCAT 104406 >seq2543 Length=10996 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||| ||||| | ||| || || |||| ||| | ||| || Sbjct 996 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 937 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || ||||||| || | ||| ||||| |||||||||||||| ||||| | | Sbjct 936 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 877 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| | | | |||| ||||| || | ||||| || ||| Sbjct 876 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCTTT 817 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 || |||||||| || |||||||| ||||||||| Sbjct 816 CCGGTAAGAGTCTTTACAAAGATTTGCATGCTT 784 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||| ||||| | ||| || || |||| ||| | ||| || Sbjct 1224 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1165 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || ||||||| || | ||| ||||| |||||||||||||| ||||| | | Sbjct 1164 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1105 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| ||||||| | | | | |||| ||||| || | || |||||||| Sbjct 1104 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1045 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || || |||||||| Sbjct 1044 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||| ||||| | ||| || || |||| ||| | ||| || Sbjct 1908 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1849 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || ||||||| || | ||| ||||| |||||||||||||| ||||| | | Sbjct 1848 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1789 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| ||||||| | | | | |||| ||||| || | || |||||||| Sbjct 1788 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1729 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || || |||||||| Sbjct 1728 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1700 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||| ||||| | ||| || || |||| ||| | ||| || Sbjct 2136 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 2077 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || ||||||| || | ||| ||||| |||||||||||||| ||||| | | Sbjct 2076 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 2017 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| ||||||| | | | | |||| ||||| || | || |||||||| Sbjct 2016 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1957 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || || |||||||| Sbjct 1956 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1928 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||| ||||| | ||| || || |||| ||| | ||| || Sbjct 1680 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1621 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || ||||||| || | ||| ||||| |||||||||||||| ||||| | | Sbjct 1620 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1561 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| | | | |||| ||||| || | ||||| || ||| Sbjct 1560 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAAGTGATAGTCTTT 1501 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| ||||| || || || ||||| Sbjct 1500 CCGGTAAGTGTTTTGACGAAAATTTGCAT 1472 >seq175 Length=1843 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||| ||||| | ||| || || |||| ||| | ||| || Sbjct 996 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 937 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || ||||||| || | ||| ||||| |||||||||||||| ||||| | | Sbjct 936 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 877 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| | | | |||| ||||| || | ||||| || ||| Sbjct 876 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCTTT 817 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 || |||||||| || |||||||| ||||||||| Sbjct 816 CCGGTAAGAGTCTTTACAAAGATTTGCATGCTT 784 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||| ||||| | ||| || || |||| ||| | ||| || Sbjct 1452 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1393 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || ||||||| || | ||| ||||| |||||||||||||| ||||| | | Sbjct 1392 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1333 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| | | | |||| ||||| || | ||||| || ||| Sbjct 1332 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAAGTGATAGTCTTT 1273 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| ||||| || || || ||||| Sbjct 1272 CCGGTAAGTGTTTTGACGAAAATTTGCAT 1244 >seq3880 Length=130811 Score = 116 bits (128), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| ||||| || || || ||||| || | || ||||||||||| | ||||||||||| Sbjct 118853 TCCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCT 118794 Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 || ||| || ||| || || ||||| || ||||||| | |||||| |||||||| Sbjct 118793 --TAATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGT 118736 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 ||||||||||||||||| | |||||| || || | | || || | || Sbjct 118735 GGAATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCA 118676 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| ||||| || |||||||| || || || || ||||| Sbjct 118675 ACTTCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACGAATATTTGCAT 118626 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||| |||| | ||| || || | ||| ||||||||||| | |||| Sbjct 118632 TTTGCATACCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTAT 118573 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || | ||| |||||| | ||||| || |||| || | | ||| |||| Sbjct 118572 AGTCACTGAGAGTACGACCATCCTCTAATTGTTTGCCAGCAAAAATGAGACGTTGTTGAT 118513 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | |||||||| ||||| || || | ||| ||| ||| ||| ||| | | |||| Sbjct 118512 CAGGAGGAATGCCTTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATCAGAAG 118453 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | ||||| ||||| |||||||| || || ||||| || ||||| Sbjct 118452 ATTCAACTTCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCAT 118398 >seq2672 Length=76086 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| ||||| || || || ||||| || | || ||||| ||||| | || ||||| || Sbjct 17615 TCCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACT 17674 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 | ||| ||| || || ||||| || |||| |||| ||||||||||||||| || Sbjct 17675 TAAAGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGCTGATCTGGTGG 17734 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 |||||||| || || | |||||| || || | | ||| || | | || || Sbjct 17735 GATACCTTCCTTATCTTGAATTTTGCTTTTCACATTATCAATAGTATCGGAGGATTCAAC 17794 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| || || || |||||||| || |||||||| ||||| Sbjct 17795 TTCTAATGTGATTGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 17842 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| ||||| | ||||| || || | || | ||| |||| ||||| || Sbjct 17874 GTTGATTCTTTTTGAATATTATAGTCACTAAGGGTACGGCCATCTTCCAATTGTTTGCCT 17933 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | | ||| |||||||| || ||||||||||| || | || ||| ||| Sbjct 17934 GCAAAGATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGGATCTTTTGCTTT 17993 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | | | | | |||| || || || | || || ||||| ||||||||||| Sbjct 17994 ACGTTGTCAATACTATCAGAAGATTCAACTTCCAAAGTAATAGTTTTACCAGTAAGAGTC 18053 Query 94991 TTCACAAAGATCTGCATGCTTACAACATAT 95020 ||||||||||| ||||| | | || |||| Sbjct 18054 TTCACAAAGATTTGCATAATAAGAAAATAT 18083 >seq2895 Length=151278 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||||||||| | ||| || || |||| ||| ||| ||| Sbjct 145913 ACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCTTCC 145972 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||||| ||| | || || | | ||| ||||| |||||||||||||| ||||| | | Sbjct 145973 AATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 146032 Query 94919 ATTTTTGCCTTGAC 94932 || ||| |||||| Sbjct 146033 ATCTTTTGCTTGAC 146046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448269228127560