Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq3638 199 6e-46 seq2503 109 9e-19 >seq3638 Length=92813 Score = 199 bits (220), Expect = 6e-46 Identities = 382/555 (69%), Gaps = 6/555 (1%) Strand=Plus/Minus Query 193640 ACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCC 193699 |||| | || ||||| ||| | | |||||| |||||| ||||| |||||||| ||| | Sbjct 88547 ACCTACCGAAATCTACAATTTAGCAGCTCAATCTCATGTCAAAGTGTCCTTTGACATGTC 88488 Query 193700 AGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTAT 193759 || |||||| | ||||||||||| | || || ||| | | | || || |||||| Sbjct 88487 CGAATATACTGGTGATGTTGATGCTCTCGGCACACTTCGTCTCTTGGACGCCATTCGTAC 88428 Query 193760 GTTGGGAATGGA-GAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTG 193818 || || | || || |||||| |||| || || |||||| ||||| || ||| Sbjct 88427 GTGTGGTTTAACTGATCGA-GTTCGCTTCTACCAAGCCTCTACCTCTGAACTTTACGGTA 88369 Query 193819 GTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTG 193878 ||| | | || || | | ||||||||||| || |||| || |||||||| |||| Sbjct 88368 AAGTTGTCGAAACACCTCAAAAGGAAACCACACCCTTCTATCCTCGTTCTCCTTACGGTG 88309 Query 193879 TAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATG-GAT-TCCA 193936 | || ||| | |||||||| ||||| | ||||| ||||| || || | ||| | | Sbjct 88308 TCGCCAAGCTCTATGGTTACTGGATTGTGGTCAATTACCGTGAATCGTACGAGATGTATA 88249 Query 193937 CGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAAC 193996 | || || ||||| |||||||| |||||||| || | | ||| || ||||| || Sbjct 88248 C-CT-GTAACGGTATCCTCTTCAACCACGAATCACCTCGTCGTGGTCGTACCTTTGTTAC 88191 Query 193997 TCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCT 194056 ||| ||||| || | | | || || | ||| | | || || | |||||| | Sbjct 88190 TCGCAAGATCACGCGTGCTGTAGCTGATATCCATTTAGGTCGTCAAGACTGTCTTTACTT 88131 Query 194057 TGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTG 194116 |||||| || |||| ||| | ||||||||||| || ||||||||||||| ||||| Sbjct 88130 GGGTAATATTGATGCCAAGCGTGATTGGGGACATGCCCGTGATTATGTTGAAGGCATGTG 88071 Query 194117 GTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACAGTATTC 194176 | | ||| | || || || | || | || | ||| | |||||||||||| || | Sbjct 88070 GCTCATGCTCCAGCAAGAAAAGCCTCAAGACTTTGTCTTGGCTACAGGTGAAACACATAC 88011 Query 194177 TGTTAGAGACTTTGT 194191 ||| ||| ||||| Sbjct 88010 TGTAAGAAGTTTTGT 87996 >seq2503 Length=34491 Score = 109 bits (120), Expect = 9e-19 Identities = 346/530 (65%), Gaps = 6/530 (1%) Strand=Plus/Plus Query 193641 CCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCA 193700 ||| |||| | || ||||| | ||||||| |||||| || ||||| ||||| ||| | Sbjct 2785 CCTACTGAAGTGTACAATCTCGCTGCTCAATCTCATGTCAAGGTTTCGTTTGACATGTCT 2844 Query 193701 GAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATG 193760 || || || | |||| |||||| | || || ||| | || | || || | |||| Sbjct 2845 GAATACACAGGTGATGTCGATGCTCTTGGTACACTTCGTTTATTGGATGCCATCCGTACC 2904 Query 193761 TTGGGAATGGA-GAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGG 193819 | || | | || || || || | || || || || ||| || || || ||| Sbjct 2905 TGTGGTTTAGCTGACCGA-GTCCGATTTTACCAAGCCTCGACCTCTGAGCTTTACGGTAA 2963 Query 193820 TGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGT 193879 || | | || || | | || || ||||| || | || || |||||||||||||| Sbjct 2964 GGTCGTGGAGACACCTCAAAAGGAGACTACACCCTTCTACCCTCGTTCTCCTTATGGTGT 3023 Query 193880 AGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGC 193939 || ||| | |||||||| ||||| | || || || || || || | | | || Sbjct 3024 GGCCAAGCTCTATGGTTACTGGATTACGGTCAACTACCGAGAATCTTACGACATGTATGC 3083 Query 193940 TAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCG 193999 || ||||| || || || || ||||| || | | ||| || ||||| ||||| Sbjct 3084 CTGTAACGGTATCCTGTTTAACCATGAATCACCCCGTCGTGGTCGTACCTTTGTCACTCG 3143 Query 194000 TAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGAT--TACAGAAGATTCTTTATCTT 194057 ||||| || | | | || || | || || |||| | | |||| | |||||||| Sbjct 3144 AAAGATCACTCGTGCTGTAGCTGATAT-TCACTTGGGTCGTCAAGAATGT-CTTTATCTG 3201 Query 194058 GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117 ||||| || | || ||| | ||||||||||| || || ||||| || | |||||| Sbjct 3202 GGTAACATTGACGCCAAGCGTGATTGGGGACATGCGCGTGACTATGTAGAGGGCATGTGG 3261 Query 194118 TTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGA 194167 | ||| | || || || | || | |||| ||| | ||||| || || Sbjct 3262 CTCATGCTTCAGCAAGAAAAGCCTCAAGATTTTGTCTTGGCTACCGGAGA 3311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807515619700760