Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3799 347 2e-90 seq3792 172 7e-38 seq2503 129 7e-25 >seq3799 Length=82858 Score = 347 bits (384), Expect = 2e-90 Identities = 836/1257 (67%), Gaps = 16/1257 (1%) Strand=Plus/Minus Query 62874 ATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 62933 |||||||| || || || | ||| |||| |||||||| || || |||| | Sbjct 43819 ATTACAAAAGTGGGTAAAGCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTT 43760 Query 62934 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 62993 | ||||| | || || || ||||| |||||||| || || || || || |||||||| Sbjct 43759 GTATATTCGACAATTTCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGG 43700 Query 62994 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63053 || |||||| | ||||| |||||||| || || || || || |||| |||||| | || Sbjct 43699 TTGCTCTTTCTATTACAAGCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGT 43640 Query 63054 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT 63113 | ||| | || || | ||| | | | ||||| ||| | | | ||| | ||| Sbjct 43639 GCTTCCAAGATAGCATACCATAACTTTTGTGCCTTAATTGTCTCTCTCGCTCTTCCTTCG 43580 Query 63114 CTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 63173 | ||| || | ||| | | | ||||| || |||||||||| | ||| ||||| Sbjct 43579 CGTTCATAGCTTTCATAAAGAGCTACAAACTCATCACCCCAAACATCTTGCAAACCAGGT 43520 Query 63174 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63233 ||||| ||||| | | ||||| || || | ||||| || |||| ||| |||||| Sbjct 43519 GCTTCATTAGGACAAAAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAGAGA 43460 Query 63234 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 63293 || || | |||||| || ||| | ||| | || ||| ||| || || || ||| Sbjct 43459 TCGGGTACCCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGTTC 43400 Query 63294 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63353 ||| | | ||| | || | | ||||| | |||||| || || | || ||||| | Sbjct 43399 TTTCTTAAATCTAAAAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCGAAG 43340 Query 63354 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63413 |||| || || ||||| || || ||||| | || | || |||||||| | || | | Sbjct 43339 GCTCCCGGACGCTTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACACGC 43280 Query 63414 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCA 63473 | ||| |||| | ||| || || |||||| ||||||| |||||| |||| ||||| Sbjct 43279 AGCATGGGAAGCAAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGGCA 43220 Query 63474 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63533 |||||||| ||| ||||| || || ||||| |||| || ||| || || | Sbjct 43219 CGAATATTGTGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGATT 43160 Query 63534 TTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63593 ||||| || |||||||| || || || ||| || ||||| | || | || || Sbjct 43159 TTTAATGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAG 43100 Query 63594 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 63653 ||||| || ||||| || || ||||| || || || ||| || || ||||| || Sbjct 43099 GACATCTGAGGACGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAGAAT 43040 Query 63654 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCC 63712 || ||||| | | ||||| |||||||| || | ||| ||||| || | || || || Sbjct 43039 TTCTCAGACATCAAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCG-TGGATACC 42981 Query 63713 TACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 63770 | ||||||||||| ||| |||| ||||| | || | ||||| || || || Sbjct 42980 AATAGCGACACGCATGATAAGATGT--TGAGGACGCTCGGCAGTCTTGCCGTCAATCTTG 42923 Query 63771 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 63828 | | |||||| ||| | ||| || || |||||| ||||||| ||||| |||| | Sbjct 42922 AGTAGATAGGATCGTTCGAGAGTCTTGAATCCAAAAAAGTTGTACTTGAAA--TCTCTGT 42865 Query 63829 CGTAAATAATAACCGAGTTGA---GTTTATCCTTATATTTGTTAACTATATCCATGGTGA 63885 | |||||||| | ||||| | ||| | || | | |||| ||| ||| Sbjct 42864 CATAAATAATGGCTGAGTTCAGACGTTCTGCGTTGTCCTGAACAACTTTAT---AGGTTG 42808 Query 63886 TACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 63945 | || || || || |||||||| | || ||||| ||||||||| | | ||||| Sbjct 42807 TGTCGGATATCATGGGGGAATGTTTGTTTGTCTTGGGATTTACATAGTTGTAGAGATCCT 42748 Query 63946 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 64005 | ||||||| | ||| | || |||||||||||||||| ||| | || || | | Sbjct 42747 CAATCACTTGAGAAAAGACCTTCTTTGTTTCCTTGTGTAAATTACTAATTGCAATACGAG 42688 Query 64006 CGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCA 64065 | || | | || || || ||||| | || || | || || |||| || || | Sbjct 42687 CAGCCAAGAGTGCGTAGTCGGGATGACGAGTGGTCATATATGCAGCGGTTTCAGCAGCAA 42628 Query 64066 GAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAG 64122 | |||| | ||| || || |||||||| | || | || |||||||| || || Sbjct 42627 GGTTGTCAAGTTCAACAGTAGTTACTCCTTCGTAAACACCAGAAATAACCTGCACAG 42571 Score = 158 bits (174), Expect = 2e-33 Identities = 529/822 (64%), Gaps = 21/822 (3%) Strand=Plus/Minus Query 62025 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 62084 ||||| | ||| ||||| ||||| || | || ||| || ||||| |||||||| Sbjct 44732 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAGCCATAAAAGTGCATACTT 44673 Query 62085 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 62144 || || || | | | || || || ||| ||| |||| | |||||||||||| ||| Sbjct 44672 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 44613 Query 62145 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 62204 |||| || | ||| || ||||| | | || || || | |||||||| | ||| Sbjct 44612 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGCTGAGAGATTTCCCAGACAGTC 44553 Query 62205 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGT------ATTCTGAATGGATCCACCA 62258 || || | | || | | || || || |||| ||| || | || |||||| Sbjct 44552 TTGTAGAGTTCTTTGAGGTGTT---GAGGGATTGTGGGTACATTTTGGACAGACCCACCA 44496 Query 62259 TCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTC-TCTCGGTTAAAACTCT 62317 || ||||| ||| | ||||||| ||||| ||||| ||| | | || ||| | | Sbjct 44495 TCGGCCATGATCATGTTCTTGACTTCATCGTTCCA-AATACCCATATCAACCAAATCACG 44437 Query 62318 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 62377 ||| | || || || | |||| |||| || || | || | || || |||| || Sbjct 44436 AAGTAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTT 44377 Query 62378 ACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 62437 | || || || || | ||||||| ||||| ||||||| || || || || || Sbjct 44376 AGAAGTGTAAGGCTCAAAACACTCATTGAAACCCAACATTTGAGAGGTAGAGGCGGTAGG 44317 Query 62438 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGG 62497 |||||| || | ||| | ||| | || |||| | || || || ||||| | Sbjct 44316 CATAGGGGCTAACAAAAGTGAATTGCGAACGCCGTGCTTGGCTATCTTTTCCTTTAGTGA 44257 Query 62498 TTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACC--- 62554 |||| | ||||||| | ||| || ||||| || || Sbjct 44256 AGCCCAGTCCCAAAGAGAGGTGGGTGTCACATTCCACATGTCGTATTGTAAGATGCCCTT 44197 Query 62555 -GTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 62613 | ||| || || ||| |||| || || || ||||| | ||| || || | ||| | Sbjct 44196 GGATACAGGACTA----CCTTCATAAGTTTCATAAGGTCCGTACTTTTCGGCCAATTCGC 44141 Query 62614 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTG 62673 | || || |||||| | | ||| || ||||| ||||| | |||||| | || | Sbjct 44140 ATGAGGCTTCCAATGCAGCATGATAGATAGTTTCAAAGATTTGAATATTTAATTGTTTGG 44081 Query 62674 CTTCCAGGCTA-TCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACA 62732 ||| |||| | ||||| || ||| |||| || || | ||| ||||| ||||| ||| Sbjct 44080 CTT-CAGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCTGCTAAACCTTGGACA 44022 Query 62733 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 62792 || | ||||||||| | ||||||||| || || |||| ||||| | ||| ||||| Sbjct 44021 CCTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAG 43962 Query 62793 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTG 62834 || ||||| ||||| || || | ||||| ||| || ||| Sbjct 43961 TTGATATCAATAATCTTGTTCAAGTTTCTAGTAATCACCTTG 43920 >seq3792 Length=31585 Score = 172 bits (190), Expect = 7e-38 Identities = 299/433 (69%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 33028 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 33087 ||||| ||||| ||||| || || || |||| || ||| || | ||||| || |||||| Sbjct 6549 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCCATAAAGTCAAAC 6608 Query 33088 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACG 33147 ||||| || | |||||||||| | || || | || || | | ||| || || Sbjct 6609 GGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGACGATCAGCAACA 6668 Query 33148 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 33207 ||||| || ||| ||||| | ||||||| || || | | ||| || | || Sbjct 6669 AATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCAACAGGTAATGCA 6728 Query 33208 GCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCT 33267 |||| | ||||| |||||||| ||| || || |||||||| | || || | Sbjct 6729 TCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCCTTCACACGTTGT 6788 Query 33268 TCACTCGGTGGATGCAATAAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGAC 33325 | || ||| | | | ||||| |||||| | ||| || ||||| || |||| Sbjct 6789 TGGCTAGGTTGTTT--ACGAATGTGAGTAAACAAAAGACAAGCAAAATCCGTATGAAGAC 6846 Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 | ||||| | || ||| | ||| || ||| || | |||||||| | ||||| || | Sbjct 6847 CTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCAAACCACGTTTCT 6906 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 |||||||||| || || || ||||| ||||||||||| || ||||||||||||||||| | Sbjct 6907 TAAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCTACTGCAGCAAAAG 6966 Query 33446 CAATAAGTCTCTC 33458 ||| ||| | ||| Sbjct 6967 CAACAAGACGCTC 6979 Score = 145 bits (160), Expect = 1e-29 Identities = 209/294 (71%), Gaps = 3/294 (1%) Strand=Plus/Plus Query 33552 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 33611 |||||| | | |||||| | ||| ||||| ||||||||||| || |||| || || || Sbjct 7131 TTTTTCTTCATCATCTTTTATATAGGTATCAATCAAAAGACTGTATGTTTCAGAGTGGAT 7190 Query 33612 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGT 33671 |||||||| || ||||| || || |||||| |||| || | ||| | ||||| Sbjct 7191 ATTTTCAATCATGATTTGAAAGCCATAAAAACATTTAGCTTCAGGAATTTTGACTTCATC 7250 Query 33672 ACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 33731 |||||| || | ||||||||||||| || || || ||| | ||||| || ||||| Sbjct 7251 ACAAAAATTTTGCACCAAATTTTCATTTACAATACCATCAGAGCTCGCAAAGAAAGCCAA 7310 Query 33732 TACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT---CCAATCATTGATATC 33788 ||| | |||||| || || | || | ||| || ||||||||| || Sbjct 7311 AACACGAGAAATAAAAAATCGCTCATTCTCAGTCATTTTGTTTTCCCAATCATTTTGGTC 7370 Query 33789 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842 | || || ||||| |||||| |||||||||| ||||| |||||||| ||||| Sbjct 7371 TCTACTTAAATCTATTTCTTCAGCTGTCCAAAAAGATGCTTCTGCCTTCTTATA 7424 >seq2503 Length=34491 Score = 129 bits (142), Expect = 7e-25 Identities = 556/880 (63%), Gaps = 53/880 (6%) Strand=Plus/Plus Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074 ||| || ||| ||||| ||||| ||||| || || || |||| | || || | || Sbjct 6832 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 6891 Query 33075 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 33134 ||| || || || || || | |||| ||||| || | ||| || | | || | Sbjct 6892 CATAAAGTCGAATGGGTTAGAGGCATTGTAAATCTTGTCAAAGCCAAGGGCGACCATGAG 6951 Query 33135 TCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 33194 | ||| ||||||||||| || || ||||| | ||||| || || | | Sbjct 6952 ACGATCAGCGACGAATTCAATGTACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 7011 Query 33195 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 33254 || || ||||| | | || ||||||||||| || || || ||| ||||| Sbjct 7012 CACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACTGCTTCTACAATAATGTC 7071 Query 33255 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 33314 | ||| || || ||| ||| | | | || | |||| | ||| || ||||| Sbjct 7072 CTTGACGCGTTGTTGACTGGGTTGTTTGCGGATGTGGGTGAACAAGAGACAGGCAAAATC 7131 Query 33315 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 33374 | ||| ||||| ||||| | || || | ||| || ||||| | |||||||| | Sbjct 7132 GGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCATCAA 7191 Query 33375 GCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTAC 33434 ||||| || || | |||||| ||||| |||||||| || ||||||||||| ||||| || Sbjct 7192 ACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTTCGAC 7251 Query 33435 TGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG-TATCCACTTTTGAG 33493 || |||||||| | || | || || | || || ||| ||||| || || Sbjct 7252 AGCGGCAAAGGCGACCAGACGTTCAGCAAAGGATTCGTTG-GATGAGATCCATTTGAAAG 7310 Query 33494 CCCAATCGGCCTT---CTTTTT------------------------TAC-------ACAA 33519 ||||||||||||| ||| | ||| | Sbjct 7311 CCCAATCGGCCTTACGCTTAATACAGGGAACTAGAAGAGAGATGAATACGATATCGAATG 7370 Query 33520 GGCATCGTTTCTA-----TGGCAT---TA----AAGAGATAGttt--ttttCATTACTAT 33565 || |||| || || ||| || || || ||| ||| ||||| | ||| Sbjct 7371 GGGATCGATTGTACTTACTGGTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTTAT 7430 Query 33566 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 33625 |||||| || ||||| ||||| ||||| || |||| | ||| ||||||||||| | Sbjct 7431 CTTTAATGTAGGTATCAATCAAGAGACTGTAAGTTTCAGCATGGATGTTTTCAATCATGA 7490 Query 33626 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCG 33685 |||| || || || ||||| | || |||| ||||| ||||| |||||| || Sbjct 7491 TCTGGAAACCATAAAAACACTTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTGTA 7550 Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 |||| ||||||||||| || || || | | ||||| || ||||| ||| | |||| Sbjct 7551 CCAAGTTTTCATTCACGATACCATCTGAGCCAGCAAAGAAGGCCAAGACACGCGAGATAA 7610 Query 33746 AATATTTTTCG---TCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTA 33802 | | |||| |||| || || | |||||||| ||| || | || | Sbjct 7611 AGAAACGTTCGTTCTCTGACATTTTGTTTTCCCAATCATGCTGATCCTTGCTCAAGTCAA 7670 Query 33803 CTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842 ||||| | |||||||| || || || ||||||||||| Sbjct 7671 TCTCTTCTGCGGTCCAAAAGGAAGCTTCGGCCTTTTTATA 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622916667800360